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Selected Module: B_10_11


Module Info

Module_Name B_10_11
Cell_Type B
Name B_10_11: Eukaryotic Initiation Factors
Meta_Module B_1
Gene_Number 41

Genes:

ABHD14B, APEX1, BTF3, C12orf57, CAMLG, CCNG1, CD48, COX4I1, EEF1D, EEF1G, EEF2, EIF3D, EIF3F, EIF4B, EPB41L4A-AS1, ESD, FAAP20, FAU, FXYD5, HSD17B11, PABPC1, PFDN5, PPDPF, RIC3, RPL15, RPL4, RPLP0, RPS2, RPS24, RPS3A, RSL1D1, SLC25A6, SMDT1, SMIM27, SNHG8, ST13, TOMM20, UXT, VPS51, ZFAS1, ZNF581


UMAP Visualizations


UMAP for B_10_11

UMAP for B_10_11


Word Cloud

Enriched TF

Wordcloud for B_10_11
TF p.adjust Genes
PSMB5 0.00080146689236252 EEF2/FAU/PABPC1/RPLP0/RPS2/ZFAS1
MYBL1 0.00080146689236252 COX4I1/FXYD5/PFDN5/RPL15/RPLP0/SMIM27/SNHG8
ZZZ3 0.00870215838282488 EIF3F/RPL15/RPS2/RPS3A/VPS51
RAX2 0.00900930942131189 EEF1G/RPL4/ZNF581
NPM1 0.00900930942131189 COX4I1/EEF2/PFDN5/RPS3A/SNHG8
SETBP1 0.00900930942131189 COX4I1/EEF1G/EIF3D/EIF4B
TBX1 0.016994876277699 EIF3F/PFDN5/RPS3A/ZFAS1
HOXA10 0.0235563762951255 EEF1G/EPB41L4A-AS1/FAU/RPL4


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_10_11 R-HSA-72764 Eukaryotic Translation Termination 7/30 94/11146 4.20532977478365e-09 2.71010141041613e-08 1.64770230941815e-08 FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 7
MeSH_gene2pubmed B_10_11 D005815 Genetic Code 8/39 262/26076 4.38682710652652e-09 6.39928404164556e-07 5.46621746036922e-07 CD48/FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 8
reactome B_10_11 R-HSA-168255 Influenza Infection 8/30 157/11146 5.8315420532206e-09 3.56030988512415e-08 2.16461671781596e-08 FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A/SLC25A6 8
reactome B_10_11 R-HSA-9633012 Response of EIF2AK4 (GCN2) to amino acid deficiency 7/30 102/11146 7.47754352071959e-09 4.33697524201736e-08 2.63681797835902e-08 FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 7
GO B_10_11 GO:0008135 translation factor activity, RNA binding 6/36 83/18737 1.10130577440805e-08 7.32368339981356e-07 5.44856541022932e-07 EEF1D/EEF1G/EEF2/EIF3D/EIF3F/EIF4B 6
reactome B_10_11 R-HSA-9010553 Regulation of expression of SLITs and ROBOs 8/30 172/11146 1.19737186624474e-08 6.61405411830428e-08 4.02124887410515e-08 FAU/PABPC1/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 8
reactome B_10_11 R-HSA-1799339 SRP-dependent cotranslational protein targeting to membrane 7/30 113/11146 1.53283935156648e-08 8.08224385371416e-08 4.91388691650498e-08 FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 7
reactome B_10_11 R-HSA-2408522 Selenoamino acid metabolism 7/30 119/11146 2.19920854797955e-08 1.10916605028534e-07 6.74356854529198e-08 FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 7
MeSH_gene2pubmed B_10_11 D018075 RNA, Complementary 8/39 325/26076 2.34883342043007e-08 3.04565400182433e-06 2.60157339081553e-06 EIF3D/EIF3F/EIF4B/FAU/PABPC1/RPS2/RPS24/RPS3A 8
GO B_10_11 GO:0003735 structural constituent of ribosome 7/36 175/18737 3.65191566308248e-08 1.61901594396656e-06 1.20449148185878e-06 FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 7