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Selected Module: B_10_11


Module Info

Module_Name B_10_11
Cell_Type B
Name B_10_11: Eukaryotic Initiation Factors
Meta_Module B_1
Gene_Number 41

Genes:

ABHD14B, APEX1, BTF3, C12orf57, CAMLG, CCNG1, CD48, COX4I1, EEF1D, EEF1G, EEF2, EIF3D, EIF3F, EIF4B, EPB41L4A-AS1, ESD, FAAP20, FAU, FXYD5, HSD17B11, PABPC1, PFDN5, PPDPF, RIC3, RPL15, RPL4, RPLP0, RPS2, RPS24, RPS3A, RSL1D1, SLC25A6, SMDT1, SMIM27, SNHG8, ST13, TOMM20, UXT, VPS51, ZFAS1, ZNF581


UMAP Visualizations


UMAP for B_10_11

UMAP for B_10_11


Word Cloud

Enriched TF

Wordcloud for B_10_11
TF p.adjust Genes
PSMB5 0.00080146689236252 EEF2/FAU/PABPC1/RPLP0/RPS2/ZFAS1
MYBL1 0.00080146689236252 COX4I1/FXYD5/PFDN5/RPL15/RPLP0/SMIM27/SNHG8
ZZZ3 0.00870215838282488 EIF3F/RPL15/RPS2/RPS3A/VPS51
RAX2 0.00900930942131189 EEF1G/RPL4/ZNF581
NPM1 0.00900930942131189 COX4I1/EEF2/PFDN5/RPS3A/SNHG8
SETBP1 0.00900930942131189 COX4I1/EEF1G/EIF3D/EIF4B
TBX1 0.016994876277699 EIF3F/PFDN5/RPS3A/ZFAS1
HOXA10 0.0235563762951255 EEF1G/EPB41L4A-AS1/FAU/RPL4


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_10_11 D015138 RNA, Nuclear 7/39 108/26076 2.36723403206124e-10 3.94651730773637e-08 3.37108365167217e-08 FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 7
reactome B_10_11 R-HSA-927802 Nonsense-Mediated Decay (NMD) 8/30 116/11146 5.2158886284142e-10 4.32173629211463e-09 2.62755291807332e-09 FAU/PABPC1/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 8
reactome B_10_11 R-HSA-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) 8/30 116/11146 5.2158886284142e-10 4.32173629211463e-09 2.62755291807332e-09 FAU/PABPC1/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 8
GO B_10_11 GO:0005840 ribosome 9/39 245/19960 8.39676739226058e-10 7.64105832695713e-08 5.74515663680987e-08 APEX1/EEF2/FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 9
GO B_10_11 GO:0090079 translation regulator activity, nucleic acid binding 7/36 110/18737 1.43742221332613e-09 1.91177154372375e-07 1.42229145318586e-07 EEF1D/EEF1G/EEF2/EIF3D/EIF3F/EIF4B/PABPC1 7
WikiPathways B_10_11 WP477 Cytoplasmic ribosomal proteins 7/24 88/8836 2.30169128003428e-09 4.02795974005999e-08 3.63424938952781e-08 FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 7
GO B_10_11 GO:0022626 cytosolic ribosome 7/39 118/19960 2.77308545871308e-09 1.26175388371445e-07 9.4868713061237e-08 FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 7
reactome B_10_11 R-HSA-192823 Viral mRNA Translation 7/30 90/11146 3.09193848098446e-09 2.39109909196132e-08 1.45375353141024e-08 FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 7
reactome B_10_11 R-HSA-72695 Formation of the ternary complex, and subsequently, the 43S complex 6/30 52/11146 4.17457918049367e-09 2.71010141041613e-08 1.64770230941815e-08 EIF3D/EIF3F/FAU/RPS2/RPS24/RPS3A 6
reactome B_10_11 R-HSA-2408557 Selenocysteine synthesis 7/30 94/11146 4.20532977478365e-09 2.71010141041613e-08 1.64770230941815e-08 FAU/RPL15/RPL4/RPLP0/RPS2/RPS24/RPS3A 7