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Selected Module: B_10_11


Module Info

Module_Name B_10_11
Cell_Type B
Name B_10_11: Eukaryotic Initiation Factors
Meta_Module B_1
Gene_Number 41

Genes:

ABHD14B, APEX1, BTF3, C12orf57, CAMLG, CCNG1, CD48, COX4I1, EEF1D, EEF1G, EEF2, EIF3D, EIF3F, EIF4B, EPB41L4A-AS1, ESD, FAAP20, FAU, FXYD5, HSD17B11, PABPC1, PFDN5, PPDPF, RIC3, RPL15, RPL4, RPLP0, RPS2, RPS24, RPS3A, RSL1D1, SLC25A6, SMDT1, SMIM27, SNHG8, ST13, TOMM20, UXT, VPS51, ZFAS1, ZNF581


UMAP Visualizations


UMAP for B_10_11

UMAP for B_10_11


Word Cloud

Enriched TF

Wordcloud for B_10_11
TF p.adjust Genes
PSMB5 0.00080146689236252 EEF2/FAU/PABPC1/RPLP0/RPS2/ZFAS1
MYBL1 0.00080146689236252 COX4I1/FXYD5/PFDN5/RPL15/RPLP0/SMIM27/SNHG8
ZZZ3 0.00870215838282488 EIF3F/RPL15/RPS2/RPS3A/VPS51
RAX2 0.00900930942131189 EEF1G/RPL4/ZNF581
NPM1 0.00900930942131189 COX4I1/EEF2/PFDN5/RPS3A/SNHG8
SETBP1 0.00900930942131189 COX4I1/EEF1G/EIF3D/EIF4B
TBX1 0.016994876277699 EIF3F/PFDN5/RPS3A/ZFAS1
HOXA10 0.0235563762951255 EEF1G/EPB41L4A-AS1/FAU/RPL4


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_10_11 GO:0048027 mRNA 5'-UTR binding 2/36 24/18737 0.00096460549667866 0.0160365663822828 0.0119306469326045 RPS3A/RSL1D1 2
WikiPathways B_10_11 WP5027 nsp1 from SARS CoV 2 inhibits translation initiation in the host cell 2/24 18/8836 0.00105349569851674 0.0122907831493619 0.0110894284054393 EIF3D/EIF3F 2
reactome B_10_11 R-HSA-8876725 Protein methylation 2/30 19/11146 0.00116400064631786 0.00375066874924644 0.00228035214337125 EEF2/RPS2 2
MeSH_gene2pubmed B_10_11 D007935 Leucine-tRNA Ligase 2/39 34/26076 0.00118634387204252 0.0477401137473662 0.0407792249301004 EEF1D/EEF1G 2
MeSH_gene2pubmed B_10_11 D010850 Picornaviridae Infections 2/39 35/26076 0.00125705660556538 0.0488995019564933 0.0417695651042251 EIF4B/PABPC1 2
GO B_10_11 GO:0005925 focal adhesion 5/39 424/19960 0.00134170949272382 0.0104099064097058 0.0078269973005307 PABPC1/RPL4/RPLP0/RPS2/RPS3A 5
GO B_10_11 GO:0015934 large ribosomal subunit 3/39 114/19960 0.00142759905287591 0.0104099064097058 0.0078269973005307 RPL15/RPL4/RPLP0 3
GO B_10_11 GO:0030055 cell-substrate junction 5/39 434/19960 0.00148712948710083 0.0104099064097058 0.0078269973005307 PABPC1/RPL4/RPLP0/RPS2/RPS3A 5
GO B_10_11 GO:0031369 translation initiation factor binding 2/36 32/18737 0.00171683416586402 0.0253709937844349 0.018875135858622 EIF3F/RPS24 2
reactome B_10_11 R-HSA-429947 Deadenylation of mRNA 2/30 24/11146 0.00186309834420932 0.00568735284021793 0.00345782795185664 EIF4B/PABPC1 2