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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| WikiPathways | B_10_10 | WP28 | Selenium metabolism and selenoproteins | 2/30 | 47/8836 | 0.0109574523807261 | 0.0403695614026751 | 0.0250918577139434 | FOS/JUN | 2 |
| WikiPathways | B_10_10 | WP2637 | Interleukin 1 IL 1 structural pathway | 2/30 | 49/8836 | 0.0118705089863074 | 0.0429794290883544 | 0.0267140311125611 | FOS/NFKBIA | 2 |
| WikiPathways | B_10_10 | WP395 | IL4 signaling | 2/30 | 50/8836 | 0.0123392121101305 | 0.0439192295445322 | 0.0272981677369523 | FOS/NFKBIA | 2 |
| WikiPathways | B_10_10 | WP5224 | 2q37 copy number variation syndrome | 3/30 | 145/8836 | 0.0127092086958895 | 0.0444822304356133 | 0.0276481031279 | CXCR4/JUN/NFKBIA | 3 |
| WikiPathways | B_10_10 | WP195 | IL1 signaling | 2/30 | 54/8836 | 0.014293875860311 | 0.0492084250928741 | 0.0305856877770245 | JUN/NFKBIA | 2 |