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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D048054 | Mitogen-Activated Protein Kinase 7 | 2/41 | 96/26076 | 0.0100184272161631 | 0.0488606350608885 | 0.0303583395097231 | DUSP1/FOS | 2 |
| MeSH_gene2pubmed | B_10_10 | D051916 | Membrane Cofactor Protein | 2/41 | 96/26076 | 0.0100184272161631 | 0.0488606350608885 | 0.0303583395097231 | CD83/DDIT3 | 2 |
| MeSH_gene2pubmed | B_10_10 | D044140 | Receptor, Angiotensin, Type 1 | 3/41 | 284/26076 | 0.0100416882399593 | 0.0488928634701832 | 0.0303783638297101 | DUSP1/FOS/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D050378 | T-Lymphocytes, Regulatory | 3/41 | 285/26076 | 0.0101375653300325 | 0.0492779665711514 | 0.0306176380567207 | CD83/PPP1R15A/TSC22D3 | 3 |
| WikiPathways | B_10_10 | WP5115 | Network map of SARS CoV 2 signaling | 4/30 | 254/8836 | 0.0101503416230178 | 0.0394735507561803 | 0.0245349388158715 | DUSP1/FOS/JUN/JUNB | 4 |
| MeSH_gene2pubmed | B_10_10 | D000880 | Anthraquinones | 2/41 | 97/26076 | 0.0102192350236909 | 0.0495824399824052 | 0.0308068150328081 | CCNL1/DDIT3 | 2 |
| MeSH_gene2pubmed | B_10_10 | D017472 | Receptors, Interleukin-1 | 3/41 | 286/26076 | 0.010233977734788 | 0.0495824399824052 | 0.0308068150328081 | GADD45B/JUND/PPP1R15A | 3 |
| MeSH_gene2pubmed | B_10_10 | D018816 | Genes, cdc | 3/41 | 287/26076 | 0.0103309260419053 | 0.0499696851054923 | 0.0310474201519497 | BTG2/DDIT3/PPP1R15A | 3 |
| WikiPathways | B_10_10 | WP4861 | Endoplasmic reticulum stress response in coronavirus infection | 2/30 | 46/8836 | 0.0105132126206052 | 0.0400814457628358 | 0.0249127783187551 | DDIT3/PPP1R15A | 2 |
| WikiPathways | B_10_10 | WP4630 | Measles virus infection | 3/30 | 136/8836 | 0.0106883855367562 | 0.0400814457628358 | 0.0249127783187551 | FOS/JUN/NFKBIA | 3 |