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Selected Module: B_10_10


Module Info

Module_Name B_10_10
Cell_Type B
Name B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB
Meta_Module B_12
Gene_Number 41

Genes:

ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331


UMAP Visualizations


UMAP for B_10_10

UMAP for B_10_10


Word Cloud

Enriched TF

Wordcloud for B_10_10
TF p.adjust Genes
PSMB5 4.90379990902434e-09 BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36
CREB 4.90379990902434e-09 AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3
CREB 4.90379990902434e-09 AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3
CREB 1.73096420202783e-08 DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3
SRF 1.17134429958281e-07 DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1
CREB 3.64129821560901e-07 DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3
ATF 6.82227196758743e-07 AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A
SRF 1.34911861648055e-06 DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_10_10 D000564 Ameloblastoma 2/41 95/26076 0.00981941240460375 0.048616854671023 0.0302068726318955 FOS/PMAIP1 2
MeSH_gene2pubmed B_10_10 D001839 Bombesin 2/41 95/26076 0.00981941240460375 0.048616854671023 0.0302068726318955 FOS/JUN 2
MeSH_gene2pubmed B_10_10 D002100 D002100 2/41 95/26076 0.00981941240460375 0.048616854671023 0.0302068726318955 FOS/FOSB 2
MeSH_gene2pubmed B_10_10 D022782 CCAAT-Enhancer-Binding Protein-beta 3/41 282/26076 0.00985153762046788 0.0486937953765887 0.0302546778243325 CD83/DDIT3/JUN 3
MeSH_gene2pubmed B_10_10 D019892 eIF-2 Kinase 3/41 283/26076 0.00994634587035862 0.0488606350608885 0.0303583395097231 DDIT3/NFKBIA/PPP1R15A 3
MeSH_gene2pubmed B_10_10 D020382 Interleukin-18 3/41 283/26076 0.00994634587035862 0.0488606350608885 0.0303583395097231 CD83/CXCR4/JUN 3
MeSH_gene2pubmed B_10_10 D050881 E1A-Associated p300 Protein 3/41 283/26076 0.00994634587035862 0.0488606350608885 0.0303583395097231 DUSP1/JUN/NR4A1 3
MeSH_gene2pubmed B_10_10 D009285 Naphthoquinones 2/41 96/26076 0.0100184272161631 0.0488606350608885 0.0303583395097231 DUSP1/JUNB 2
MeSH_gene2pubmed B_10_10 D009596 Nitrophenols 2/41 96/26076 0.0100184272161631 0.0488606350608885 0.0303583395097231 DUSP1/PMAIP1 2
MeSH_gene2pubmed B_10_10 D011946 Receptors, Antigen 2/41 96/26076 0.0100184272161631 0.0488606350608885 0.0303583395097231 CD83/DUSP2 2