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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| KEGG | B_10_10 | hsa05161 | Hepatitis B | 3/23 | 163/8541 | 0.00912979730023012 | 0.0386494752376408 | 0.024346126133947 | FOS/JUN/NFKBIA | 3 |
| WikiPathways | B_10_10 | WP4565 | Neural crest cell migration in cancer | 2/30 | 43/8836 | 0.00923033553085299 | 0.0372763550284448 | 0.0231692632758253 | FOS/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D051819 | Immunoglobulin J Recombination Signal Sequence-Binding Protein | 2/41 | 92/26076 | 0.00923318457689426 | 0.0464188868454821 | 0.0288412200284026 | DDIT3/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D004271 | DNA, Fungal | 3/41 | 276/26076 | 0.00929387016091337 | 0.0466441073375071 | 0.0289811551756417 | FOS/JUN/PPP1R15A | 3 |
| MeSH_gene2pubmed | B_10_10 | D019390 | D019390 | 3/41 | 277/26076 | 0.00938548667839618 | 0.0469102396144956 | 0.0291465098422203 | CXCR4/NFKBIA/NR4A1 | 3 |
| MeSH_gene2pubmed | B_10_10 | D000361 | Agammaglobulinemia | 2/41 | 93/26076 | 0.00942678520863501 | 0.0469102396144956 | 0.0291465098422203 | CD83/CXCR4 | 2 |
| MeSH_gene2pubmed | B_10_10 | D005744 | Gastric Acid | 2/41 | 93/26076 | 0.00942678520863501 | 0.0469102396144956 | 0.0291465098422203 | AREG/DUSP1 | 2 |
| MeSH_gene2pubmed | B_10_10 | D010581 | Peyer's Patches | 2/41 | 93/26076 | 0.00942678520863501 | 0.0469102396144956 | 0.0291465098422203 | CD83/CXCR4 | 2 |
| MeSH_gene2pubmed | B_10_10 | D051917 | Leukosialin | 2/41 | 93/26076 | 0.00942678520863501 | 0.0469102396144956 | 0.0291465098422203 | CD83/CXCR4 | 2 |
| WikiPathways | B_10_10 | WP236 | Adipogenesis | 3/30 | 131/8836 | 0.00965331828195681 | 0.038248996966244 | 0.023773812650698 | DDIT3/GADD45B/KLF6 | 3 |