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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D053481 | Secretory Leukocyte Peptidase Inhibitor | 4/41 | 71/26076 | 4.73472256525485e-06 | 0.00025433686623762 | 0.00015802588168285 | AREG/CXCR4/DUSP1/NFKBIA | 4 |
| MeSH_gene2pubmed | B_10_10 | D015693 | Gene Products, nef | 6/41 | 280/26076 | 4.76448489205361e-06 | 0.00025433686623762 | 0.00015802588168285 | CD69/CXCR4/DUSP1/FOS/JUN/NFKBIA | 6 |
| MeSH_gene2pubmed | B_10_10 | D051736 | Proto-Oncogene Proteins c-mdm2 | 7/41 | 440/26076 | 5.08629215395611e-06 | 0.00026666703150027 | 0.00016568692298507 | BTG2/DDIT3/JUN/NR4A1/PMAIP1/SERTAD1/ZNF331 | 7 |
| MeSH_gene2pubmed | B_10_10 | D054360 | Chemokine CXCL1 | 5/41 | 162/26076 | 5.44111747520665e-06 | 0.00027945415491209 | 0.00017363188386012 | AREG/CXCR4/DUSP1/JUN/ZFP36 | 5 |
| GO | B_10_10 | GO:0072538 | T-helper 17 type immune response | 4/41 | 54/18986 | 5.47340502302351e-06 | 0.0011182053594337 | 0.0008223283825684 | CD69/JUNB/LY9/NFKBID | 4 |
| MeSH_gene2pubmed | B_10_10 | D019459 | Urothelium | 6/41 | 289/26076 | 5.71054690793007e-06 | 0.00027945415491209 | 0.00017363188386012 | AREG/CXCR4/DDIT3/DUSP1/FOS/JUN | 6 |
| MeSH_gene2pubmed | B_10_10 | D018928 | Immunity, Mucosal | 5/41 | 164/26076 | 5.7765086212834e-06 | 0.00027945415491209 | 0.00017363188386012 | CD83/CXCR4/DUSP1/JUN/ZFP36 | 5 |
| MeSH_gene2pubmed | B_10_10 | D054400 | Receptors, CCR7 | 5/41 | 164/26076 | 5.7765086212834e-06 | 0.00027945415491209 | 0.00017363188386012 | CD69/CD83/CXCR4/JUN/JUNB | 5 |
| MeSH_gene2pubmed | B_10_10 | D001773 | Blood Cells | 7/41 | 449/26076 | 5.80609790518995e-06 | 0.00027945415491209 | 0.00017363188386012 | CD69/CD83/CXCR4/DUSP2/MYADM/NFKBIA/ZFP36 | 7 |
| WikiPathways | B_10_10 | WP4877 | Host pathogen interaction of human coronaviruses MAPK signaling | 4/30 | 36/8836 | 5.89793181623049e-06 | 0.0003096414203521 | 0.00019245882768752 | DDIT3/FOS/JUN/JUNB | 4 |