Module Explorer
Instructions
- Enter a module name.
- Click Submit to search for the detailed information of the module.
- Results will appear below if available.
Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D039741 | Antigens, Dermatophagoides | 2/41 | 84/26076 | 0.00775027164977171 | 0.0407792071034583 | 0.0253371453858788 | CD69/CD83 | 2 |
| hallmark | B_10_10 | HALLMARK_P53_PATHWAY | HALLMARK_P53_PATHWAY | 5/28 | 200/4384 | 0.00783030017754474 | 0.0326262507397698 | 0.020606053098802 | BTG2/DDIT3/FOS/JUN/PPP1R15A | 5 |
| MeSH_gene2pubmed | B_10_10 | D035381 | TATA-Binding Protein Associated Factors | 3/41 | 261/26076 | 0.00798281122517459 | 0.0419276095833857 | 0.0260506766843566 | FOS/JUN/ZFP36 | 3 |
| WikiPathways | B_10_10 | WP2516 | ATM signaling | 2/30 | 40/8836 | 0.0080234386675845 | 0.0330376886312303 | 0.0205347037106394 | JUN/NFKBIA | 2 |
| WikiPathways | B_10_10 | WP4564 | Neural crest cell migration during development | 2/30 | 40/8836 | 0.0080234386675845 | 0.0330376886312303 | 0.0205347037106394 | FOS/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D010586 | Phagocytes | 3/41 | 262/26076 | 0.00806655358668716 | 0.0422176738045696 | 0.0262309008688223 | CXCR4/FOS/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D002251 | Carbon Tetrachloride | 2/41 | 86/26076 | 0.00810993461368436 | 0.0422176738045696 | 0.0262309008688223 | AREG/DDIT3 | 2 |
| MeSH_gene2pubmed | B_10_10 | D018792 | Encephalitis, Viral | 2/41 | 86/26076 | 0.00810993461368436 | 0.0422176738045696 | 0.0262309008688223 | CXCR4/SLC2A3 | 2 |
| MeSH_gene2pubmed | B_10_10 | D040502 | Calgranulin B | 2/41 | 86/26076 | 0.00810993461368436 | 0.0422176738045696 | 0.0262309008688223 | AREG/CD69 | 2 |
| MeSH_gene2pubmed | B_10_10 | D051925 | CD79 Antigens | 2/41 | 86/26076 | 0.00810993461368436 | 0.0422176738045696 | 0.0262309008688223 | CD83/DUSP2 | 2 |