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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| KEGG | B_10_10 | hsa05030 | Cocaine addiction | 2/23 | 49/8541 | 0.00755422678409492 | 0.0342638143421448 | 0.0215835050974141 | FOSB/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D007075 | Immunoglobulin M | 4/41 | 497/26076 | 0.00756253578723535 | 0.0402079805478871 | 0.0249822279827507 | CD83/FOS/NFKBIA/SBDS | 4 |
| MeSH_gene2pubmed | B_10_10 | D019573 | Epithelium, Corneal | 3/41 | 256/26076 | 0.00757187212911811 | 0.0402079805478871 | 0.0249822279827507 | AREG/DDIT3/KLF6 | 3 |
| MeSH_gene2pubmed | B_10_10 | D019256 | Cadmium Chloride | 2/41 | 83/26076 | 0.00757323339338608 | 0.0402079805478871 | 0.0249822279827507 | DDIT3/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D053687 | Adult Stem Cells | 2/41 | 83/26076 | 0.00757323339338608 | 0.0402079805478871 | 0.0249822279827507 | CD83/CXCR4 | 2 |
| MeSH_gene2pubmed | B_10_10 | D055436 | Growth Differentiation Factor 15 | 2/41 | 83/26076 | 0.00757323339338608 | 0.0402079805478871 | 0.0249822279827507 | BTG2/PPP1R15A | 2 |
| MeSH_gene2pubmed | B_10_10 | D018262 | Adenocarcinoma, Clear Cell | 3/41 | 258/26076 | 0.00773469629237275 | 0.0407792071034583 | 0.0253371453858788 | BTG2/CXCR4/SLC2A3 | 3 |
| MeSH_gene2pubmed | B_10_10 | D051096 | Proto-Oncogene Proteins c-ret | 3/41 | 258/26076 | 0.00773469629237275 | 0.0407792071034583 | 0.0253371453858788 | FOS/NR4A2/SLC2A3 | 3 |
| MeSH_gene2pubmed | B_10_10 | D051567 | Proto-Oncogene Proteins c-vav | 3/41 | 258/26076 | 0.00773469629237275 | 0.0407792071034583 | 0.0253371453858788 | CD69/CXCR4/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D017728 | Lymphoma, Large-Cell, Anaplastic | 2/41 | 84/26076 | 0.00775027164977171 | 0.0407792071034583 | 0.0253371453858788 | CD83/JUNB | 2 |