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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_10 | GO:0098531 | ligand-activated transcription factor activity | 2/40 | 60/18737 | 0.00727385058292098 | 0.0488478951799001 | 0.0344141822651596 | NR4A1/NR4A2 | 2 |
| GO | B_10_10 | GO:0046982 | protein heterodimerization activity | 4/40 | 363/18737 | 0.00730795282218978 | 0.0488478951799001 | 0.0344141822651596 | DDIT3/NR4A1/NR4A2/TUBA1A | 4 |
| MeSH_gene2pubmed | B_10_10 | D000302 | Adrenal Cortex | 3/41 | 253/26076 | 0.00733149891413745 | 0.0395685309042418 | 0.0245849218618425 | DUSP1/NR4A1/NR4A2 | 3 |
| MeSH_gene2pubmed | B_10_10 | D001933 | Brain Stem | 3/41 | 253/26076 | 0.00733149891413745 | 0.0395685309042418 | 0.0245849218618425 | FOS/SLC2A3/TUBA1A | 3 |
| MeSH_gene2pubmed | B_10_10 | D006943 | Hyperglycemia | 3/41 | 253/26076 | 0.00733149891413745 | 0.0395685309042418 | 0.0245849218618425 | CXCR4/DUSP1/SLC2A3 | 3 |
| MeSH_gene2pubmed | B_10_10 | D050784 | Proto-Oncogene Protein c-ets-1 | 3/41 | 253/26076 | 0.00733149891413745 | 0.0395685309042418 | 0.0245849218618425 | DDIT3/FOS/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D054422 | Chemokine CCL22 | 2/41 | 82/26076 | 0.00739806530514887 | 0.0398516793620261 | 0.0247608491088453 | CD83/CXCR4 | 2 |
| MeSH_gene2pubmed | B_10_10 | D010525 | Peripheral Nerves | 3/41 | 254/26076 | 0.00741110930915063 | 0.0398516793620261 | 0.0247608491088453 | AREG/DUSP1/SLC2A3 | 3 |
| MeSH_gene2pubmed | B_10_10 | D001424 | Bacterial Infections | 3/41 | 255/26076 | 0.00749123344716802 | 0.0401355135052652 | 0.0249372023894395 | CD83/CXCR4/DUSP1 | 3 |
| MeSH_gene2pubmed | B_10_10 | D006918 | Hydroxyurea | 3/41 | 255/26076 | 0.00749123344716802 | 0.0401355135052652 | 0.0249372023894395 | CXCR4/DUSP1/PPP1R15A | 3 |