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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D001848 | Bone Diseases, Developmental | 2/41 | 80/26076 | 0.00705336376752345 | 0.0387078056475679 | 0.024050131646076 | SBDS/ZFP36 | 2 |
| MeSH_gene2pubmed | B_10_10 | D009861 | Onium Compounds | 2/41 | 80/26076 | 0.00705336376752345 | 0.0387078056475679 | 0.024050131646076 | DDIT3/GADD45B | 2 |
| MeSH_gene2pubmed | B_10_10 | D016588 | Anticarcinogenic Agents | 3/41 | 251/26076 | 0.00717381611308115 | 0.0392222050428422 | 0.0243697409075167 | DDIT3/NFKBIA/PPP1R15A | 3 |
| MeSH_gene2pubmed | B_10_10 | D017570 | MyoD Protein | 3/41 | 251/26076 | 0.00717381611308115 | 0.0392222050428422 | 0.0243697409075167 | FOS/IFRD1/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D018950 | Lipopolysaccharide Receptors | 4/41 | 490/26076 | 0.00720063534047743 | 0.0392956605197802 | 0.0244153806398892 | CD83/CXCR4/DUSP1/JUN | 4 |
| MeSH_gene2pubmed | B_10_10 | D005980 | Glutathione Reductase | 2/41 | 81/26076 | 0.00722477341527537 | 0.0393542388631697 | 0.0244517768356063 | DDIT3/DUSP1 | 2 |
| MeSH_gene2pubmed | B_10_10 | D020895 | Enterocytes | 3/41 | 252/26076 | 0.00725240145393919 | 0.0394315753125286 | 0.0244998279135996 | CXCR4/DDIT3/FOSB | 3 |
| WikiPathways | B_10_10 | WP170 | Nuclear receptors | 2/30 | 38/8836 | 0.00726183292285647 | 0.0311221410979563 | 0.0193440876999829 | NR4A1/NR4A2 | 2 |
| WikiPathways | B_10_10 | WP2036 | TNF related weak inducer of apoptosis TWEAK signaling | 2/30 | 38/8836 | 0.00726183292285647 | 0.0311221410979563 | 0.0193440876999829 | JUN/NFKBIA | 2 |
| WikiPathways | B_10_10 | WP3614 | Photodynamic therapy induced HIF 1 survival signaling | 2/30 | 38/8836 | 0.00726183292285647 | 0.0311221410979563 | 0.0193440876999829 | PMAIP1/SLC2A3 | 2 |