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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D015431 | Weight Loss | 3/41 | 247/26076 | 0.00686457937719159 | 0.0382783358765699 | 0.0237832912928781 | FOS/FOSB/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D018219 | Histiocytoma, Benign Fibrous | 2/41 | 79/26076 | 0.00688384241921965 | 0.0382783358765699 | 0.0237832912928781 | AREG/DDIT3 | 2 |
| MeSH_gene2pubmed | B_10_10 | D044005 | Tetrahydroisoquinolines | 2/41 | 79/26076 | 0.00688384241921965 | 0.0382783358765699 | 0.0237832912928781 | AREG/DDIT3 | 2 |
| MeSH_gene2pubmed | B_10_10 | D010024 | Osteoporosis | 3/41 | 248/26076 | 0.00694112454200453 | 0.0384965375218731 | 0.0239188654543977 | FOS/FOSB/SBDS | 3 |
| MeSH_gene2pubmed | B_10_10 | D005355 | Fibrosis | 4/41 | 485/26076 | 0.00694930684148254 | 0.0384965375218731 | 0.0239188654543977 | AREG/CXCR4/FOS/SLC2A3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D045325 | HCT116 Cells | 4/41 | 486/26076 | 0.0069990979325364 | 0.0386592346141083 | 0.0240199532433134 | DDIT3/DUSP1/KLF6/PMAIP1 | 4 |
| KEGG | B_10_10 | hsa05224 | Breast cancer | 3/23 | 148/8541 | 0.00700272333283158 | 0.0329387356766522 | 0.0207488098750565 | FOS/GADD45B/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D007774 | Lactation | 3/41 | 249/26076 | 0.00701817849091271 | 0.0386592346141083 | 0.0240199532433134 | AREG/DDIT3/FOSB | 3 |
| MeSH_gene2pubmed | B_10_10 | D051025 | bcl-Associated Death Protein | 3/41 | 249/26076 | 0.00701817849091271 | 0.0386592346141083 | 0.0240199532433134 | AREG/GADD45B/PMAIP1 | 3 |
| GO | B_10_10 | GO:0004879 | nuclear receptor activity | 2/40 | 59/18737 | 0.00704083819386628 | 0.0488478951799001 | 0.0344141822651596 | NR4A1/NR4A2 | 2 |