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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D011132 | Polyribosomes | 3/41 | 241/26076 | 0.00641594460533821 | 0.0363652767592142 | 0.022594659624164 | PPP1R15A/SBDS/ZFP36 | 3 |
| MeSH_gene2pubmed | B_10_10 | D008221 | Lymphoid Tissue | 4/41 | 475/26076 | 0.00646431419949093 | 0.0365688371670624 | 0.0227211368171946 | BTG2/CD69/CD83/CXCR4 | 4 |
| MeSH_gene2pubmed | B_10_10 | D019746 | Intramolecular Oxidoreductases | 3/41 | 245/26076 | 0.00671301198333126 | 0.0377754952789527 | 0.0234708638026764 | CD83/JUN/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D011700 | Putrescine | 2/41 | 78/26076 | 0.00671621544128519 | 0.0377754952789527 | 0.0234708638026764 | DDIT3/DUSP1 | 2 |
| MeSH_gene2pubmed | B_10_10 | D026423 | S-Nitroso-N-Acetylpenicillamine | 2/41 | 78/26076 | 0.00671621544128519 | 0.0377754952789527 | 0.0234708638026764 | DDIT3/FOS | 2 |
| reactome | B_10_10 | R-HSA-3700989 | Transcriptional Regulation by TP53 | 4/24 | 359/11146 | 0.00674890152375338 | 0.0490287845990319 | 0.0340579240981982 | BTG2/FOS/JUN/PMAIP1 | 4 |
| WikiPathways | B_10_10 | WP4659 | Gastrin signaling | 3/30 | 115/8836 | 0.00675098493406256 | 0.030819713829416 | 0.0191561128563789 | FOS/JUN/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D017493 | Leukocyte Common Antigens | 4/41 | 481/26076 | 0.00675250101205092 | 0.0379069655284541 | 0.0235525495700599 | CD83/CXCR4/NFKBIA/SLC2A3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D013004 | Somatostatin | 3/41 | 246/26076 | 0.0067885421442023 | 0.0379641137816723 | 0.0235880572148423 | AREG/DUSP1/IFRD1 | 3 |
| MeSH_gene2pubmed | B_10_10 | D048029 | TNF Receptor-Associated Factor 6 | 3/41 | 246/26076 | 0.0067885421442023 | 0.0379641137816723 | 0.0235880572148423 | DUSP1/JUN/NFKBIA | 3 |