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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D004068 | Digestive System Physiological Phenomena | 2/41 | 74/26076 | 0.00606477312894343 | 0.0348457415001525 | 0.0216505342104418 | AREG/CXCR4 | 2 |
| MeSH_gene2pubmed | B_10_10 | D011133 | Polysaccharide-Lyases | 2/41 | 74/26076 | 0.00606477312894343 | 0.0348457415001525 | 0.0216505342104418 | AREG/CXCR4 | 2 |
| MeSH_gene2pubmed | B_10_10 | D015752 | Genes, env | 2/41 | 74/26076 | 0.00606477312894343 | 0.0348457415001525 | 0.0216505342104418 | CD83/CXCR4 | 2 |
| MeSH_gene2pubmed | B_10_10 | D020738 | Leptin | 4/41 | 467/26076 | 0.00609300696681834 | 0.0349395868253489 | 0.0217088426675497 | AREG/NFKBIA/SLC2A3/ZFP36 | 4 |
| KEGG | B_10_10 | hsa05418 | Fluid shear stress and atherosclerosis | 3/23 | 141/8541 | 0.00612378991560517 | 0.0299123584339176 | 0.0188424305095544 | DUSP1/FOS/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D019409 | Interleukin-15 | 3/41 | 237/26076 | 0.00612691965498196 | 0.0350655674600917 | 0.0217871175994331 | CD83/TSC22D3/ZFP36 | 3 |
| MeSH_gene2pubmed | B_10_10 | D008981 | Molsidomine | 2/41 | 75/26076 | 0.0062247616433793 | 0.0354871848251682 | 0.0220490790556491 | DDIT3/PPP1R15A | 2 |
| MeSH_gene2pubmed | B_10_10 | D024201 | Bystander Effect | 2/41 | 75/26076 | 0.0062247616433793 | 0.0354871848251682 | 0.0220490790556491 | CD83/NFKBIA | 2 |
| MeSH_gene2pubmed | B_10_10 | D053179 | Caspase 7 | 3/41 | 239/26076 | 0.00627043044612048 | 0.035678263158546 | 0.0221678008223721 | DDIT3/PMAIP1/PPP1R15A | 3 |
| MeSH_gene2pubmed | B_10_10 | D044783 | F-Box Proteins | 3/41 | 240/26076 | 0.00634293664754272 | 0.0360210096657359 | 0.0223807578340457 | JUN/PMAIP1/SERTAD1 | 3 |