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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| KEGG | B_10_10 | hsa05162 | Measles | 3/23 | 139/8541 | 0.0058856437157531 | 0.0298990700760258 | 0.0188340598904099 | FOS/JUN/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D006094 | Gram-Positive Bacteria | 2/41 | 73/26076 | 0.00590670954431917 | 0.0343912783259938 | 0.0213681648282473 | AREG/CD83 | 2 |
| MeSH_gene2pubmed | B_10_10 | D009589 | Nitrogen Oxides | 2/41 | 73/26076 | 0.00590670954431917 | 0.0343912783259938 | 0.0213681648282473 | CXCR4/DUSP2 | 2 |
| MeSH_gene2pubmed | B_10_10 | D019277 | Entropy | 2/41 | 73/26076 | 0.00590670954431917 | 0.0343912783259938 | 0.0213681648282473 | FOS/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D001168 | Arthritis | 3/41 | 234/26076 | 0.00591539358127618 | 0.0343912783259938 | 0.0213681648282473 | CXCR4/DUSP1/ZFP36 | 3 |
| MeSH_gene2pubmed | B_10_10 | D051746 | ZAP-70 Protein-Tyrosine Kinase | 3/41 | 234/26076 | 0.00591539358127618 | 0.0343912783259938 | 0.0213681648282473 | CD69/CXCR4/DUSP1 | 3 |
| GO | B_10_10 | GO:0140313 | molecular sequestering activity | 2/40 | 54/18737 | 0.00592831660366817 | 0.0470560130416161 | 0.0331517704810391 | CD69/NFKBIA | 2 |
| MeSH_gene2pubmed | B_10_10 | D005293 | Ferritins | 3/41 | 235/26076 | 0.00598540484058946 | 0.0345928122282887 | 0.0214933829024897 | JUN/JUND/ZFP36 | 3 |
| MeSH_gene2pubmed | B_10_10 | D017697 | Premenopause | 3/41 | 235/26076 | 0.00598540484058946 | 0.0345928122282887 | 0.0214933829024897 | AREG/CD83/DUSP2 | 3 |
| MeSH_gene2pubmed | B_10_10 | D045726 | Metalloproteases | 3/41 | 235/26076 | 0.00598540484058946 | 0.0345928122282887 | 0.0214933829024897 | AREG/COQ7/CXCR4 | 3 |