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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D001202 | Ascitic Fluid | 3/41 | 230/26076 | 0.0056403005853178 | 0.033522110361322 | 0.0208281289459956 | AREG/DUSP1/DUSP2 | 3 |
| MeSH_gene2pubmed | B_10_10 | D007372 | Interferons | 4/41 | 458/26076 | 0.00569267207449439 | 0.0337650206277081 | 0.0209790551942558 | IFRD1/JUNB/JUND/PMAIP1 | 4 |
| MeSH_gene2pubmed | B_10_10 | D003864 | Depression, Chemical | 3/41 | 231/26076 | 0.00570833296098576 | 0.033789648333577 | 0.0209943570063419 | FOS/JUN/JUNB | 3 |
| MeSH_gene2pubmed | B_10_10 | D016403 | Lymphoma, Large B-Cell, Diffuse | 4/41 | 459/26076 | 0.0057362554843616 | 0.0338866118754239 | 0.0210546028897568 | CD83/DDIT3/JUN/JUNB | 4 |
| reactome | B_10_10 | R-HSA-168898 | Toll-like Receptor Cascades | 3/24 | 172/11146 | 0.00575907899951648 | 0.0431058337236536 | 0.0299435367438975 | FOS/JUN/NFKBIA | 3 |
| KEGG | B_10_10 | hsa05135 | Yersinia infection | 3/23 | 138/8541 | 0.00576871000787687 | 0.0298990700760258 | 0.0188340598904099 | FOS/JUN/NFKBIA | 3 |
| WikiPathways | B_10_10 | WP313 | Hepatocyte growth factor receptor signaling | 2/30 | 34/8836 | 0.00584394120096409 | 0.0272717256044991 | 0.0169508469922701 | FOS/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D020031 | Epstein-Barr Virus Infections | 3/41 | 233/26076 | 0.00584587848862898 | 0.0343269984852294 | 0.0213282261490401 | CXCR4/JUN/LY9 | 3 |
| MeSH_gene2pubmed | B_10_10 | D051034 | Inhibitor of Apoptosis Proteins | 3/41 | 233/26076 | 0.00584587848862898 | 0.0343269984852294 | 0.0213282261490401 | DUSP1/NR4A1/PMAIP1 | 3 |
| MeSH_gene2pubmed | B_10_10 | D051418 | Focal Adhesion Kinase 2 | 3/41 | 233/26076 | 0.00584587848862898 | 0.0343269984852294 | 0.0213282261490401 | CXCR4/JUN/JUND | 3 |