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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D009828 | Oleanolic Acid | 4/41 | 65/26076 | 3.32171806401708e-06 | 0.000212012265999 | 0.0001317285447355 | DDIT3/FOS/JUN/JUNB | 4 |
| MeSH_gene2pubmed | B_10_10 | D007109 | Immunity | 7/41 | 419/26076 | 3.69114273684045e-06 | 0.0002226254862738 | 0.00013832280500232 | CD83/CXCR4/DUSP1/DUSP2/FOS/JUN/SLC2A3 | 7 |
| MeSH_gene2pubmed | B_10_10 | D053671 | Syndecan-4 | 4/41 | 67/26076 | 3.7520062238493e-06 | 0.0002226254862738 | 0.00013832280500232 | AREG/BTG2/CXCR4/PPP1R15A | 4 |
| MeSH_gene2pubmed | B_10_10 | D051267 | NF-E2-Related Factor 2 | 5/41 | 151/26076 | 3.85927881301483e-06 | 0.0002226254862738 | 0.00013832280500232 | DDIT3/FOS/JUN/JUNB/JUND | 5 |
| MeSH_gene2pubmed | B_10_10 | D018139 | Simplexvirus | 6/41 | 270/26076 | 3.86713208445634e-06 | 0.0002226254862738 | 0.00013832280500232 | CD83/GADD45B/NFKBIA/PMAIP1/PPP1R15A/ZFP36 | 6 |
| MeSH_gene2pubmed | B_10_10 | D054311 | nef Gene Products, Human Immunodeficiency Virus | 6/41 | 270/26076 | 3.86713208445634e-06 | 0.0002226254862738 | 0.00013832280500232 | CD69/CXCR4/DUSP1/FOS/JUN/NFKBIA | 6 |
| MeSH_gene2pubmed | B_10_10 | D051793 | Hypoxia-Inducible Factor 1 | 6/41 | 271/26076 | 3.9501286311896e-06 | 0.00022303033963793 | 0.00013857435056379 | CXCR4/DDIT3/DUSP1/JUN/NFKBIA/SLC2A3 | 6 |
| MeSH_gene2pubmed | B_10_10 | D006679 | HIV Seropositivity | 5/41 | 153/26076 | 4.11587509300738e-06 | 0.00022800394854848 | 0.00014166457867292 | CD69/CD83/CXCR4/DUSP1/SLC2A3 | 5 |
| WikiPathways | B_10_10 | WP366 | TGF beta signaling pathway | 6/30 | 132/8836 | 4.38722640518068e-06 | 0.00030710584836264 | 0.00019088283306751 | FOS/FOSB/JUN/JUNB/JUND/KLF6 | 6 |
| KEGG | B_10_10 | hsa04657 | IL-17 signaling pathway | 5/23 | 95/8541 | 4.3974797558016e-06 | 0.00011169598579736 | 7.03596760928257e-05 | FOS/FOSB/JUN/JUND/NFKBIA | 5 |