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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D004298 | Dopamine | 4/41 | 444/26076 | 0.00510566851998486 | 0.0314095472543692 | 0.0195155404387716 | CCNL1/DDIT3/NR4A2/SLC2A3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D007945 | Leukemia, Lymphoid | 3/41 | 222/26076 | 0.00511367969604513 | 0.0314095472543692 | 0.0195155404387716 | DUSP1/DUSP2/FOS | 3 |
| MeSH_gene2pubmed | B_10_10 | D011008 | Pneumococcal Infections | 2/41 | 69/26076 | 0.00529382777156273 | 0.0324481802449023 | 0.0201608691970513 | DUSP1/NFKBIA | 2 |
| MeSH_gene2pubmed | B_10_10 | D011921 | Rats, Inbred WKY | 3/41 | 226/26076 | 0.00537308399635091 | 0.0328653637776797 | 0.0204200758019213 | AREG/DUSP1/JUND | 3 |
| MeSH_gene2pubmed | B_10_10 | D051076 | Proto-Oncogene Proteins c-fyn | 4/41 | 452/26076 | 0.00543583352563825 | 0.0328888180820894 | 0.0204346485502154 | CXCR4/DUSP1/LY9/TUBA1A | 4 |
| MeSH_gene2pubmed | B_10_10 | D018941 | Antigens, CD19 | 3/41 | 227/26076 | 0.00543915320223999 | 0.0328888180820894 | 0.0204346485502154 | CD69/CD83/CXCR4 | 3 |
| MeSH_gene2pubmed | B_10_10 | D008080 | Liposarcoma | 2/41 | 70/26076 | 0.00544412996862923 | 0.0328888180820894 | 0.0204346485502154 | DDIT3/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D015419 | Spastic Paraplegia, Hereditary | 2/41 | 70/26076 | 0.00544412996862923 | 0.0328888180820894 | 0.0204346485502154 | CHMP1B/TUBA1A | 2 |
| MeSH_gene2pubmed | B_10_10 | D019405 | Cytochrome P-450 CYP11B2 | 2/41 | 70/26076 | 0.00544412996862923 | 0.0328888180820894 | 0.0204346485502154 | NR4A1/NR4A2 | 2 |
| MeSH_gene2pubmed | B_10_10 | D054428 | Chemokine CX3CL1 | 2/41 | 70/26076 | 0.00544412996862923 | 0.0328888180820894 | 0.0204346485502154 | CD83/NFKBIA | 2 |