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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D022763 | CCAAT-Enhancer-Binding Protein-alpha | 3/41 | 205/26076 | 0.0040967903046653 | 0.0278430007742994 | 0.0172995555506456 | IFRD1/JUN/JUNB | 3 |
| KEGG | B_10_10 | hsa05132 | Salmonella infection | 4/23 | 251/8541 | 0.0041505524832214 | 0.0239600075167781 | 0.0150929181208051 | FOS/JUN/NFKBIA/TUBA1A | 4 |
| MeSH_gene2pubmed | B_10_10 | D015459 | Leukemia-Lymphoma, Adult T-Cell | 4/41 | 419/26076 | 0.00416156656488468 | 0.0282179201720587 | 0.0175325023871281 | DDIT3/JUND/NR4A1/ZFP36 | 4 |
| MeSH_gene2pubmed | B_10_10 | D014470 | Umbilical Cord | 3/41 | 208/26076 | 0.00426631251529524 | 0.0287951575744985 | 0.0178911544803549 | CXCR4/NR4A1/NR4A2 | 3 |
| MeSH_gene2pubmed | B_10_10 | D014660 | Vasoactive Intestinal Peptide | 3/41 | 208/26076 | 0.00426631251529524 | 0.0287951575744985 | 0.0178911544803549 | CD83/CXCR4/FOS | 3 |
| WikiPathways | B_10_10 | WP3972 | PDGFR beta pathway | 2/30 | 29/8836 | 0.0042740335057128 | 0.0216146833842767 | 0.0134346904243123 | FOS/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D007577 | JC Virus | 2/41 | 62/26076 | 0.00429682513600444 | 0.0288512421879893 | 0.0179260012590655 | FOS/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D043883 | D043883 | 2/41 | 62/26076 | 0.00429682513600444 | 0.0288512421879893 | 0.0179260012590655 | DUSP1/FOS | 2 |
| WikiPathways | B_10_10 | WP5475 | Hallmark of cancer sustaining proliferative signaling | 3/30 | 98/8836 | 0.00432293667685533 | 0.0216146833842767 | 0.0134346904243123 | FOS/JUN/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D004171 | Diploidy | 3/41 | 209/26076 | 0.0043237556412518 | 0.0288512421879893 | 0.0179260012590655 | FOS/JUN/PMAIP1 | 3 |