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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D016202 | N-Methylaspartate | 3/41 | 201/26076 | 0.00387726652199104 | 0.0273390601665917 | 0.0169864445965522 | CXCR4/IFRD1/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D014771 | Virion | 4/41 | 411/26076 | 0.00388653053828642 | 0.0273390601665917 | 0.0169864445965522 | CD83/CXCR4/FOS/JUN | 4 |
| MeSH_gene2pubmed | B_10_10 | D020168 | ATP Binding Cassette Transporter, Subfamily B, Member 1 | 4/41 | 411/26076 | 0.00388653053828642 | 0.0273390601665917 | 0.0169864445965522 | CD83/CXCR4/DDIT3/JUN | 4 |
| MeSH_gene2pubmed | B_10_10 | D020319 | Oligodeoxyribonucleotides, Antisense | 4/41 | 411/26076 | 0.00388653053828642 | 0.0273390601665917 | 0.0169864445965522 | CXCR4/DUSP1/FOS/JUN | 4 |
| MeSH_gene2pubmed | B_10_10 | D050763 | Cyclin-Dependent Kinase Inhibitor p18 | 2/41 | 59/26076 | 0.00389940788453538 | 0.0273390601665917 | 0.0169864445965522 | PMAIP1/SERTAD1 | 2 |
| MeSH_gene2pubmed | B_10_10 | D005340 | Fibrinogen | 4/41 | 412/26076 | 0.00392021264650378 | 0.0273390601665917 | 0.0169864445965522 | CD83/DUSP2/FOS/NFKBIA | 4 |
| MeSH_gene2pubmed | B_10_10 | D011947 | Receptors, Antigen, B-Cell | 4/41 | 412/26076 | 0.00392021264650378 | 0.0273390601665917 | 0.0169864445965522 | CD83/DUSP2/JUN/NFKBIA | 4 |
| MeSH_gene2pubmed | B_10_10 | D016899 | Interferon-beta | 4/41 | 412/26076 | 0.00392021264650378 | 0.0273390601665917 | 0.0169864445965522 | CD69/CD83/JUN/NFKBIA | 4 |
| MeSH_gene2pubmed | B_10_10 | D015214 | Antigens, Differentiation, Myelomonocytic | 4/41 | 413/26076 | 0.00395409289579287 | 0.0275099922797343 | 0.0170926490107484 | CD83/DUSP1/LY9/SLC2A3 | 4 |
| WikiPathways | B_10_10 | WP75 | Toll like receptor signaling | 3/30 | 95/8836 | 0.0039610965054112 | 0.0207957566534088 | 0.0129256833334471 | FOS/JUN/NFKBIA | 3 |