Module Explorer
Instructions
- Enter a module name.
- Click Submit to search for the detailed information of the module.
- Results will appear below if available.
Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| KEGG | B_10_10 | hsa04928 | Parathyroid hormone synthesis, secretion and action | 3/23 | 115/8541 | 0.00346037434715417 | 0.021973377104429 | 0.0138414973886167 | FOS/JUND/NR4A2 | 3 |
| MeSH_gene2pubmed | B_10_10 | D014801 | Vitamin A | 3/41 | 194/26076 | 0.00351077232211536 | 0.0258336529767687 | 0.01605109730702 | CD83/DDIT3/NR4A2 | 3 |
| MeSH_gene2pubmed | B_10_10 | D051844 | alpha-Synuclein | 3/41 | 194/26076 | 0.00351077232211536 | 0.0258336529767687 | 0.01605109730702 | DDIT3/NR4A2/TUBA1A | 3 |
| MeSH_gene2pubmed | B_10_10 | D014066 | Palatine Tonsil | 4/41 | 400/26076 | 0.00352894408614253 | 0.0259024495922862 | 0.0160938423718027 | CD83/CXCR4/JUN/LY9 | 4 |
| MeSH_gene2pubmed | B_10_10 | D010963 | Plasmodium falciparum | 3/41 | 195/26076 | 0.00356176401407273 | 0.025948732370515 | 0.0161225990241297 | CD69/CD83/CXCR4 | 3 |
| MeSH_gene2pubmed | B_10_10 | D017260 | Receptor-CD3 Complex, Antigen, T-Cell | 3/41 | 195/26076 | 0.00356176401407273 | 0.025948732370515 | 0.0161225990241297 | FOSB/JUN/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D054405 | Chemokine CCL3 | 3/41 | 195/26076 | 0.00356176401407273 | 0.025948732370515 | 0.0161225990241297 | AREG/CD83/CXCR4 | 3 |
| MeSH_gene2pubmed | B_10_10 | D053446 | CASP8 and FADD-Like Apoptosis Regulating Protein | 3/41 | 196/26076 | 0.00361320847251265 | 0.0262264382464662 | 0.0162951446583701 | DDIT3/GADD45B/SBDS | 3 |
| MeSH_gene2pubmed | B_10_10 | D000855 | Anorexia | 2/41 | 57/26076 | 0.00364454591435906 | 0.0262264382464662 | 0.0162951446583701 | FOS/FOSB | 2 |
| MeSH_gene2pubmed | B_10_10 | D002186 | Cannabinoids | 2/41 | 57/26076 | 0.00364454591435906 | 0.0262264382464662 | 0.0162951446583701 | AREG/DDIT3 | 2 |