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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D015126 | 8,11,14-Eicosatrienoic Acid | 2/41 | 54/26076 | 0.00327750464768751 | 0.0248009114577591 | 0.0154094290679394 | DDIT3/DUSP1 | 2 |
| MeSH_gene2pubmed | B_10_10 | D000952 | Antigens, Polyomavirus Transforming | 4/41 | 393/26076 | 0.00331349299719349 | 0.0249446549737438 | 0.0154987405239847 | FOS/JUN/NFKBIA/PPP1R15A | 4 |
| MeSH_gene2pubmed | B_10_10 | D001205 | Ascorbic Acid | 4/41 | 393/26076 | 0.00331349299719349 | 0.0249446549737438 | 0.0154987405239847 | CXCR4/DDIT3/NFKBIA/SLC2A3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D009566 | Nitrates | 3/41 | 191/26076 | 0.00336050097925643 | 0.025233838555235 | 0.0156784175448954 | DDIT3/DUSP2/PPP1R15A | 3 |
| MeSH_gene2pubmed | B_10_10 | D000008 | Abdominal Neoplasms | 2/41 | 55/26076 | 0.00339780965214869 | 0.0253197186261638 | 0.0157317769895102 | CXCR4/DDIT3 | 2 |
| MeSH_gene2pubmed | B_10_10 | D005812 | Genes, Switch | 2/41 | 55/26076 | 0.00339780965214869 | 0.0253197186261638 | 0.0157317769895102 | FOSB/ZFP36 | 2 |
| MeSH_gene2pubmed | B_10_10 | D053492 | Elafin | 2/41 | 55/26076 | 0.00339780965214869 | 0.0253197186261638 | 0.0157317769895102 | DDIT3/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D023083 | beta-Defensins | 3/41 | 192/26076 | 0.00341014210015276 | 0.0253472840659455 | 0.0157489040894463 | AREG/DUSP1/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D019284 | D019284 | 4/41 | 397/26076 | 0.00343547107432592 | 0.0254710683692447 | 0.0158258143854514 | DDIT3/NR4A1/PMAIP1/PPP1R15A | 4 |
| MeSH_gene2pubmed | B_10_10 | D009587 | Nitrogen Isotopes | 3/41 | 193/26076 | 0.00346023211447815 | 0.0255900289372994 | 0.0158997275736196 | DUSP1/DUSP2/ZNF331 | 3 |