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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D013582 | Synovial Fluid | 4/41 | 384/26076 | 0.00304994731688084 | 0.0234414799014716 | 0.0145647801051377 | AREG/CD83/GADD45B/NFKBIA | 4 |
| GO | B_10_10 | GO:0046683 | response to organophosphorus | 3/41 | 135/18986 | 0.00307626906168435 | 0.047907763520631 | 0.035231376201185 | AREG/FOS/FOSB | 3 |
| WikiPathways | B_10_10 | WP2840 | Hair follicle development cytodifferentiation stage 3 of 3 | 3/30 | 87/8836 | 0.003089186187369 | 0.0176340661173627 | 0.0109605222985111 | FOS/FOSB/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D032446 | Myoblasts | 4/41 | 386/26076 | 0.00310722295562325 | 0.0238193383752216 | 0.0147995530633368 | DUSP1/IFRD1/JUN/SLC2A3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D055666 | Lipopeptides | 2/41 | 53/26076 | 0.00315925028209611 | 0.0241551011151932 | 0.0150081708850673 | CD83/DUSP1 | 2 |
| WikiPathways | B_10_10 | WP254 | Apoptosis | 3/30 | 88/8836 | 0.00319092624980849 | 0.0176340661173627 | 0.0109605222985111 | JUN/NFKBIA/PMAIP1 | 3 |
| WikiPathways | B_10_10 | WP5098 | T cell activation SARS CoV 2 | 3/30 | 88/8836 | 0.00319092624980849 | 0.0176340661173627 | 0.0109605222985111 | FOS/JUN/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D018696 | Neuroprotective Agents | 4/41 | 390/26076 | 0.00322397884152788 | 0.0245859789057815 | 0.0152758860761936 | BTG2/CXCR4/DUSP1/NFKBIA | 4 |
| MeSH_gene2pubmed | B_10_10 | D055503 | Protein Multimerization | 3/41 | 189/26076 | 0.00326256017367701 | 0.0248009114577591 | 0.0154094290679394 | DDIT3/FOS/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D006851 | Hydrochloric Acid | 2/41 | 54/26076 | 0.00327750464768751 | 0.0248009114577591 | 0.0154094290679394 | DUSP1/FOS | 2 |