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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D051200 | Toll-Like Receptor 8 | 2/41 | 50/26076 | 0.00281685542699183 | 0.0222607439160855 | 0.0138311591877872 | CD83/NFKBIA | 2 |
| MeSH_gene2pubmed | B_10_10 | D010741 | D010741 | 4/41 | 376/26076 | 0.00282808497299042 | 0.0222607439160855 | 0.0138311591877872 | CD69/FOS/PMAIP1/TUBA1A | 4 |
| MeSH_gene2pubmed | B_10_10 | D015842 | Serine Proteinase Inhibitors | 4/41 | 376/26076 | 0.00282808497299042 | 0.0222607439160855 | 0.0138311591877872 | AREG/DDIT3/FOS/JUN | 4 |
| MeSH_gene2pubmed | B_10_10 | D053495 | Osteopontin | 4/41 | 376/26076 | 0.00282808497299042 | 0.0222607439160855 | 0.0138311591877872 | IFRD1/JUN/NR4A1/NR4A2 | 4 |
| reactome | B_10_10 | R-HSA-2454202 | Fc epsilon receptor (FCERI) signaling | 3/24 | 134/11146 | 0.00285864160031907 | 0.0252173026885289 | 0.0175172398816544 | FOS/JUN/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D005234 | Fatty Liver | 3/41 | 181/26076 | 0.00288848653218978 | 0.0226149238893579 | 0.0140512200990453 | DDIT3/KLF6/PPP1R15A | 3 |
| MeSH_gene2pubmed | B_10_10 | D019947 | Receptors, Interleukin-6 | 3/41 | 181/26076 | 0.00288848653218978 | 0.0226149238893579 | 0.0140512200990453 | CD83/FOS/JUN | 3 |
| GO | B_10_10 | GO:0071676 | negative regulation of mononuclear cell migration | 2/41 | 37/18986 | 0.00288860951647036 | 0.0475196607779913 | 0.0349459653882849 | CD69/DUSP1 | 2 |
| MeSH_gene2pubmed | B_10_10 | D050779 | Nuclear Factor 90 Proteins | 2/41 | 51/26076 | 0.00292891921657619 | 0.0228167389795182 | 0.0141766128823695 | DUSP1/ZFP36 | 2 |
| MeSH_gene2pubmed | B_10_10 | D001169 | Arthritis, Experimental | 3/41 | 182/26076 | 0.00293371218519578 | 0.0228167389795182 | 0.0141766128823695 | CXCR4/DUSP1/DUSP2 | 3 |