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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| WikiPathways | B_10_10 | WP712 | Estrogen signaling | 2/30 | 23/8836 | 0.00269724702632866 | 0.0166594669273241 | 0.0103547563859057 | FOS/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D048057 | Mitogen-Activated Protein Kinase 10 | 2/41 | 49/26076 | 0.00270686809702039 | 0.0218309447174957 | 0.0135641141529543 | DUSP1/JUN | 2 |
| MeSH_gene2pubmed | B_10_10 | D053647 | Receptors, Interleukin-15 | 2/41 | 49/26076 | 0.00270686809702039 | 0.0218309447174957 | 0.0135641141529543 | CD83/TSC22D3 | 2 |
| MeSH_gene2pubmed | B_10_10 | D001485 | Basement Membrane | 4/41 | 372/26076 | 0.00272143248181316 | 0.0218309447174957 | 0.0135641141529543 | CXCR4/JUN/PMAIP1/ZFP36 | 4 |
| MeSH_gene2pubmed | B_10_10 | D013110 | Sphingosine | 4/41 | 372/26076 | 0.00272143248181316 | 0.0218309447174957 | 0.0135641141529543 | CD83/CXCR4/DDIT3/PPP1R15A | 4 |
| KEGG | B_10_10 | hsa05166 | Human T-cell leukemia virus 1 infection | 4/23 | 224/8541 | 0.00275499642553616 | 0.0198744000801887 | 0.0125193071371267 | FOS/JUN/NFKBIA/ZFP36 | 4 |
| GO | B_10_10 | GO:0021987 | cerebral cortex development | 3/41 | 130/18986 | 0.00276511914495684 | 0.0461379880187084 | 0.0339298830418764 | FOS/PHACTR1/TUBA1A | 3 |
| MeSH_gene2pubmed | B_10_10 | D000963 | Antimetabolites | 3/41 | 179/26076 | 0.00279933581996102 | 0.0222607439160855 | 0.0138311591877872 | AREG/DDIT3/SLC2A3 | 3 |
| MeSH_gene2pubmed | B_10_10 | D051720 | Upstream Stimulatory Factors | 3/41 | 179/26076 | 0.00279933581996102 | 0.0222607439160855 | 0.0138311591877872 | DUSP1/FOS/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D013394 | Sucrase-Isomaltase Complex | 2/41 | 50/26076 | 0.00281685542699183 | 0.0222607439160855 | 0.0138311591877872 | AREG/DDIT3 | 2 |