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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D050826 | Suppressor of Cytokine Signaling Proteins | 4/41 | 352/26076 | 0.00222944657047459 | 0.0194233089938083 | 0.0120681896193424 | CXCR4/NFKBIA/SERTAD1/ZFP36 | 4 |
| GO | B_10_10 | GO:0019956 | chemokine binding | 2/40 | 33/18737 | 0.00225009087838551 | 0.0190507694369973 | 0.0134215947131767 | CXCR4/ZFP36 | 2 |
| GO | B_10_10 | GO:0140416 | transcription regulator inhibitor activity | 2/40 | 33/18737 | 0.00225009087838551 | 0.0190507694369973 | 0.0134215947131767 | DDIT3/NFKBIA | 2 |
| MeSH_gene2pubmed | B_10_10 | D008114 | Liver Neoplasms, Experimental | 4/41 | 353/26076 | 0.00225245531971532 | 0.0195657065641544 | 0.0121566648055642 | AREG/FOS/FOSB/SLC2A3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D002704 | Chlorates | 2/41 | 45/26076 | 0.0022878134120729 | 0.0196404098767428 | 0.0122030798495609 | AREG/CXCR4 | 2 |
| MeSH_gene2pubmed | B_10_10 | D014860 | Warts | 2/41 | 45/26076 | 0.0022878134120729 | 0.0196404098767428 | 0.0122030798495609 | AREG/CXCR4 | 2 |
| MeSH_gene2pubmed | B_10_10 | D019469 | Indinavir | 2/41 | 45/26076 | 0.0022878134120729 | 0.0196404098767428 | 0.0122030798495609 | CD83/SLC2A3 | 2 |
| MeSH_gene2pubmed | B_10_10 | D054639 | Mitogen-Activated Protein Kinase Phosphatases | 2/41 | 45/26076 | 0.0022878134120729 | 0.0196404098767428 | 0.0122030798495609 | DUSP1/DUSP2 | 2 |
| KEGG | B_10_10 | hsa05170 | Human immunodeficiency virus 1 infection | 4/23 | 213/8541 | 0.00229396265590218 | 0.0198744000801887 | 0.0125193071371267 | CXCR4/FOS/JUN/NFKBIA | 4 |
| MeSH_gene2pubmed | B_10_10 | D003374 | Coumarins | 3/41 | 167/26076 | 0.00230024383592372 | 0.019689550735487 | 0.0122336122990818 | CD83/NFKBIA/PPP1R15A | 3 |