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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_10_10 | R-HSA-181438 | Toll Like Receptor 2 (TLR2) Cascade | 3/24 | 116/11146 | 0.00189545026058279 | 0.0187270485745579 | 0.0130087744199998 | FOS/JUN/NFKBIA | 3 |
| WikiPathways | B_10_10 | WP437 | EGF EGFR signaling | 4/30 | 159/8836 | 0.0019211486572143 | 0.0138088606337515 | 0.00858295097035182 | FOS/FOSB/JUN/JUND | 4 |
| KEGG | B_10_10 | hsa05130 | Pathogenic Escherichia coli infection | 4/23 | 203/8541 | 0.00192402561479648 | 0.0187962502368579 | 0.0118401576295168 | FOS/JUN/NFKBIA/TUBA1A | 4 |
| MeSH_gene2pubmed | B_10_10 | D017526 | Receptor, IGF Type 1 | 4/41 | 338/26076 | 0.00192418975108604 | 0.0177624564661426 | 0.0110362602379984 | AREG/CXCR4/JUN/KLF6 | 4 |
| MeSH_gene2pubmed | B_10_10 | D013921 | Thrombocytopenia | 3/41 | 157/26076 | 0.00192991267462516 | 0.0177624564661426 | 0.0110362602379984 | DDIT3/DUSP2/IFRD1 | 3 |
| WikiPathways | B_10_10 | WP2037 | Prolactin signaling | 3/30 | 74/8836 | 0.0019461890107138 | 0.0138088606337515 | 0.00858295097035182 | FOS/JUN/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D038341 | Glycogen Synthase Kinases | 3/41 | 158/26076 | 0.00196513012705193 | 0.0180300689157014 | 0.0112025345729638 | FOS/JUN/JUND | 3 |
| MeSH_gene2pubmed | B_10_10 | D001427 | Bacterial Toxins | 4/41 | 341/26076 | 0.00198699147125687 | 0.018117412918044 | 0.0112568035949269 | DUSP1/FOS/JUN/KLF6 | 4 |
| MeSH_gene2pubmed | B_10_10 | D053824 | Protein Tyrosine Phosphatase, Non-Receptor Type 6 | 4/41 | 341/26076 | 0.00198699147125687 | 0.018117412918044 | 0.0112568035949269 | CXCR4/DUSP1/DUSP2/LY9 | 4 |
| reactome | B_10_10 | R-HSA-450282 | MAPK targets/ Nuclear events mediated by MAP kinases | 2/24 | 31/11146 | 0.00198897398730423 | 0.0188952528793902 | 0.0131256178109551 | FOS/JUN | 2 |