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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D019278 | Matrix Metalloproteinase 3 | 4/41 | 318/26076 | 0.00154031546525531 | 0.0152782642094243 | 0.00949276920799237 | AREG/FOS/FOSB/JUN | 4 |
| reactome | B_10_10 | R-HSA-168181 | Toll Like Receptor 7/8 (TLR7/8) Cascade | 3/24 | 108/11146 | 0.00154406574407933 | 0.0187270485745579 | 0.0130087744199998 | FOS/JUN/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D005079 | Excipients | 2/41 | 37/26076 | 0.00155136124778208 | 0.0153360155673003 | 0.00952865157684333 | CD83/CXCR4 | 2 |
| MeSH_gene2pubmed | B_10_10 | D019473 | Transcription Factors, TFII | 4/41 | 320/26076 | 0.00157605608349005 | 0.0155278545675396 | 0.00964784596498857 | CD69/FOS/IFRD1/JUN | 4 |
| MeSH_gene2pubmed | B_10_10 | D005881 | Gingiva | 4/41 | 322/26076 | 0.00161237181576972 | 0.0158325205722405 | 0.00983714260422085 | CD83/CXCR4/FOS/JUN | 4 |
| GO | B_10_10 | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | 2/40 | 28/18737 | 0.00162175576028818 | 0.0158433062735845 | 0.0111618817509713 | DUSP1/DUSP2 | 2 |
| GO | B_10_10 | GO:0051019 | mitogen-activated protein kinase binding | 2/40 | 28/18737 | 0.00162175576028818 | 0.0158433062735845 | 0.0111618817509713 | DUSP1/DUSP2 | 2 |
| MeSH_gene2pubmed | B_10_10 | D003849 | D003849 | 3/41 | 148/26076 | 0.00163064794578596 | 0.015851692775959 | 0.00984905477582711 | BTG2/DDIT3/PPP1R15A | 3 |
| MeSH_gene2pubmed | B_10_10 | D002822 | Choriocarcinoma | 4/41 | 323/26076 | 0.00163074688375226 | 0.015851692775959 | 0.00984905477582711 | FOS/JUND/SLC2A3/ZFP36 | 4 |
| MeSH_gene2pubmed | B_10_10 | D012509 | Sarcoma | 4/41 | 323/26076 | 0.00163074688375226 | 0.015851692775959 | 0.00984905477582711 | CD83/CXCR4/DDIT3/SLC2A3 | 4 |