Module Explorer
Instructions
- Enter a module name.
- Click Submit to search for the detailed information of the module.
- Results will appear below if available.
Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_10 | GO:0051591 | response to cAMP | 3/41 | 91/18986 | 0.00099523795352196 | 0.023248758594273 | 0.0170971404226089 | AREG/FOS/FOSB | 3 |
| MeSH_gene2pubmed | B_10_10 | D020932 | Nerve Growth Factor | 5/41 | 492/26076 | 0.00100286809269896 | 0.0109866444782244 | 0.00682627810152117 | AREG/BTG2/CD83/DUSP1/NFKBIA | 5 |
| WikiPathways | B_10_10 | WP2849 | Hematopoietic stem cell differentiation | 3/30 | 59/8836 | 0.00101004683279252 | 0.00922216673419253 | 0.00573207355909711 | CXCR4/FOS/FOSB | 3 |
| MeSH_gene2pubmed | B_10_10 | D054562 | Protein Tyrosine Phosphatase, Non-Receptor Type 1 | 4/41 | 284/26076 | 0.00101594391776317 | 0.0110885180020545 | 0.00688957468003744 | CXCR4/DUSP1/DUSP2/SLC2A3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D005095 | Exoribonucleases | 4/41 | 287/26076 | 0.00105620466102088 | 0.0114852477213233 | 0.00713607281695587 | DDIT3/FOS/JUN/ZFP36 | 4 |
| MeSH_gene2pubmed | B_10_10 | D002599 | Chalcone | 2/41 | 31/26076 | 0.00108964094210687 | 0.0117617125221535 | 0.00730784734005882 | DDIT3/PMAIP1 | 2 |
| MeSH_gene2pubmed | B_10_10 | D019595 | Severe Dengue | 2/41 | 31/26076 | 0.00108964094210687 | 0.0117617125221535 | 0.00730784734005882 | CD69/PPP1R15A | 2 |
| reactome | B_10_10 | R-HSA-112409 | RAF-independent MAPK1/3 activation | 2/24 | 23/11146 | 0.00109360691757483 | 0.0187270485745579 | 0.0130087744199998 | DUSP1/DUSP2 | 2 |
| MeSH_gene2pubmed | B_10_10 | D004965 | Estrogen Antagonists | 4/41 | 290/26076 | 0.00109757620950223 | 0.0118039697842438 | 0.00733410283812363 | AREG/JUN/PMAIP1/TSC22D3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D007986 | Luteinizing Hormone | 4/41 | 291/26076 | 0.00111161645638019 | 0.0119113354596068 | 0.00740081182830149 | AREG/JUND/NR4A1/NR4A2 | 4 |