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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D051560 | Proto-Oncogene Proteins c-bcl-6 | 3/41 | 122/26076 | 0.00093547598661702 | 0.0105232087996459 | 0.00653833387702079 | JUN/JUNB/JUND | 3 |
| MeSH_gene2pubmed | B_10_10 | D051797 | Inhibitor of Differentiation Protein 2 | 3/41 | 122/26076 | 0.00093547598661702 | 0.0105232087996459 | 0.00653833387702079 | CD83/DDIT3/FOSB | 3 |
| MeSH_gene2pubmed | B_10_10 | D015848 | Interleukin-5 | 4/41 | 279/26076 | 0.00095126580309325 | 0.0106164361153947 | 0.00659625834933996 | CD69/CD83/JUN/TSC22D3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D017370 | Interleukin-11 | 3/41 | 123/26076 | 0.00095782024136971 | 0.0106164361153947 | 0.00659625834933996 | AREG/CXCR4/FOSB | 3 |
| MeSH_gene2pubmed | B_10_10 | D005231 | Fatty Acids, Unsaturated | 5/41 | 487/26076 | 0.00095822737417561 | 0.0106164361153947 | 0.00659625834933996 | CD83/DUSP1/NFKBIA/NR4A1/SERTAD1 | 5 |
| MeSH_gene2pubmed | B_10_10 | D007107 | Immune System | 5/41 | 487/26076 | 0.00095822737417561 | 0.0106164361153947 | 0.00659625834933996 | CD83/CXCR4/LY9/PPP1R15A/SLC2A3 | 5 |
| WikiPathways | B_10_10 | WP3527 | Pre implantation embryo | 3/30 | 58/8836 | 0.00096088335642935 | 0.00917206840228025 | 0.00570093474627945 | DDIT3/FOSB/ZFP36 | 3 |
| GO | B_10_10 | GO:0008306 | associative learning | 3/41 | 90/18986 | 0.00096386741226955 | 0.0229754517863438 | 0.0168961505566479 | BTG2/FOS/TUBA1A | 3 |
| MeSH_gene2pubmed | B_10_10 | D018121 | Receptors, Cytokine | 5/41 | 489/26076 | 0.00097590173843371 | 0.0107716071580504 | 0.00669267001466417 | CD83/CXCR4/FOS/NFKBIA/TUBA1A | 5 |
| MeSH_gene2pubmed | B_10_10 | D016313 | Genes, abl | 3/41 | 124/26076 | 0.00098050056575637 | 0.010781833936557 | 0.00669902416895644 | DDIT3/JUNB/NFKBIA | 3 |