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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D009603 | Nitroso Compounds | 3/41 | 117/26076 | 0.00082872550468728 | 0.00964027217364355 | 0.00598974317973765 | CXCR4/DUSP1/DUSP2 | 3 |
| MeSH_gene2pubmed | B_10_10 | D015852 | Eukaryotic Initiation Factor-2 | 4/41 | 269/26076 | 0.00083071827654353 | 0.00964027217364355 | 0.00598974317973765 | DDIT3/NFKBIA/PMAIP1/PPP1R15A | 4 |
| GO | B_10_10 | GO:0010038 | response to metal ion | 5/41 | 345/18986 | 0.000842871815049 | 0.0205235897468426 | 0.0150930508592498 | FOS/FOSB/JUNB/JUND/TUBA1A | 5 |
| GO | B_10_10 | GO:0036499 | PERK-mediated unfolded protein response | 2/41 | 20/18986 | 0.00084343519507572 | 0.0205235897468426 | 0.0150930508592498 | DDIT3/PPP1R15A | 2 |
| MeSH_gene2pubmed | B_10_10 | D003042 | Cocaine | 3/41 | 119/26076 | 0.00087043962354942 | 0.0100614595855949 | 0.00625143749528037 | CCNL1/FOS/NR4A2 | 3 |
| MeSH_gene2pubmed | B_10_10 | D008321 | Mammary Glands, Animal | 5/41 | 479/26076 | 0.00088991036072232 | 0.010187893615571 | 0.00632999413300752 | AREG/DDIT3/FOSB/IFRD1/PMAIP1 | 5 |
| MeSH_gene2pubmed | B_10_10 | D054875 | Ubiquitination | 5/41 | 479/26076 | 0.00088991036072232 | 0.010187893615571 | 0.00632999413300752 | AREG/CHMP1B/CXCR4/NFKBIA/PPP1R15A | 5 |
| MeSH_gene2pubmed | B_10_10 | D020666 | ras-GRF1 | 3/41 | 120/26076 | 0.00089178769046381 | 0.010187893615571 | 0.00632999413300752 | JUN/JUNB/JUND | 3 |
| MeSH_gene2pubmed | B_10_10 | D000804 | Angiotensin II | 5/41 | 481/26076 | 0.0009066367041248 | 0.0103173851291102 | 0.00641045046204932 | DUSP1/FOS/FOSB/JUN/JUNB | 5 |
| MeSH_gene2pubmed | B_10_10 | D019696 | Peptidylprolyl Isomerase | 4/41 | 277/26076 | 0.00092622823081634 | 0.0104996373964355 | 0.00652368837230129 | BTG2/DDIT3/FOS/JUN | 4 |