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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D016066 | Pleural Effusion, Malignant | 3/41 | 114/26076 | 0.00076857858560562 | 0.00924814232515616 | 0.00574610305804375 | CXCR4/DUSP1/DUSP2 | 3 |
| MeSH_gene2pubmed | B_10_10 | D002934 | Cinnamates | 3/41 | 115/26076 | 0.00078830707866545 | 0.0094468146243338 | 0.00586954314641133 | DDIT3/JUN/NR4A1 | 3 |
| KEGG | B_10_10 | hsa05031 | Amphetamine addiction | 3/23 | 69/8541 | 0.00079600867829607 | 0.0144418717348001 | 0.00909724203766938 | FOS/FOSB/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D017735 | Virus Latency | 4/41 | 266/26076 | 0.00079677206923309 | 0.00950944225718852 | 0.00590845526735541 | FOS/IFRD1/JUN/NFKBIA | 4 |
| MeSH_gene2pubmed | B_10_10 | D050676 | Core Binding Factor Alpha 2 Subunit | 4/41 | 267/26076 | 0.00080797619161107 | 0.0095474814244822 | 0.00593208995720194 | AREG/CD83/DDIT3/ZFP36 | 4 |
| MeSH_gene2pubmed | B_10_10 | D015741 | Metribolone | 3/41 | 116/26076 | 0.00080835536022423 | 0.0095474814244822 | 0.00593208995720194 | AREG/JUND/PMAIP1 | 3 |
| MeSH_gene2pubmed | B_10_10 | D009077 | Mucins | 5/41 | 469/26076 | 0.00080971487557768 | 0.0095474814244822 | 0.00593208995720194 | AREG/DDIT3/DUSP1/FOS/JUN | 5 |
| GO | B_10_10 | GO:0021543 | pallium development | 4/41 | 195/18986 | 0.0008117351372009 | 0.0205235897468426 | 0.0150930508592498 | BTG2/FOS/PHACTR1/TUBA1A | 4 |
| MeSH_gene2pubmed | B_10_10 | D008668 | Metallothionein | 4/41 | 268/26076 | 0.0008192913887108 | 0.00962175806901972 | 0.00597823990162455 | AREG/DDIT3/DUSP1/JUNB | 4 |
| MeSH_gene2pubmed | B_10_10 | D009004 | Monosaccharide Transport Proteins | 5/41 | 471/26076 | 0.00082530264780987 | 0.00964027217364355 | 0.00598974317973765 | CD69/DUSP1/JUNB/SBDS/SLC2A3 | 5 |