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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D001217 | Aspartate-Ammonia Ligase | 2/41 | 24/26076 | 0.00065127613888823 | 0.00825761166065812 | 0.00513066148283397 | DDIT3/PPP1R15A | 2 |
| MeSH_gene2pubmed | B_10_10 | D054370 | Chemokine CXCL9 | 3/41 | 108/26076 | 0.00065680558825493 | 0.00825761166065812 | 0.00513066148283397 | AREG/CD83/CXCR4 | 3 |
| MeSH_gene2pubmed | B_10_10 | D054398 | Receptors, CCR4 | 3/41 | 108/26076 | 0.00065680558825493 | 0.00825761166065812 | 0.00513066148283397 | BTG2/CXCR4/JUND | 3 |
| WikiPathways | B_10_10 | WP3611 | Photodynamic therapy induced AP 1 survival signaling | 3/30 | 51/8836 | 0.00065897662628532 | 0.00674780753720451 | 0.00419412598803689 | FOS/JUN/JUNB | 3 |
| MeSH_gene2pubmed | B_10_10 | D022423 | Myeloid Cells | 5/41 | 448/26076 | 0.00065903557812247 | 0.00825761166065812 | 0.00513066148283397 | BTG2/CD83/DDIT3/PPP1R15A/ZFP36 | 5 |
| MeSH_gene2pubmed | B_10_10 | D009375 | Neoplasms, Glandular and Epithelial | 4/41 | 253/26076 | 0.00066094643741643 | 0.00825761166065812 | 0.00513066148283397 | CXCR4/DDIT3/FOS/FOSB | 4 |
| GO | B_10_10 | GO:0033549 | MAP kinase phosphatase activity | 2/40 | 18/18737 | 0.00066534344547989 | 0.00938873528621631 | 0.00661452548137908 | DUSP1/DUSP2 | 2 |
| MeSH_gene2pubmed | B_10_10 | D018869 | Heat-Shock Response | 4/41 | 254/26076 | 0.00067076253136816 | 0.00834474064447848 | 0.00518479690838993 | DDIT3/DUSP1/NFKBIA/PPP1R15A | 4 |
| MeSH_gene2pubmed | B_10_10 | D015678 | Viral Structural Proteins | 3/41 | 109/26076 | 0.00067465954921495 | 0.00835780774892447 | 0.00519291582851216 | FOS/JUN/PPP1R15A | 3 |
| WikiPathways | B_10_10 | WP2431 | Spinal cord injury | 4/30 | 120/8836 | 0.00067478075372045 | 0.00674780753720451 | 0.00419412598803689 | BTG2/FOS/NR4A1/ZFP36 | 4 |