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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D004533 | Egtazic Acid | 5/41 | 437/26076 | 0.00058908014751216 | 0.00775578167307498 | 0.004818861910024 | CXCR4/DDIT3/DUSP2/FOS/TUBA1A | 5 |
| MeSH_gene2pubmed | B_10_10 | D012859 | Sjogren's Syndrome | 4/41 | 246/26076 | 0.00059506895277732 | 0.00779965377390276 | 0.0048461207479469 | AREG/CD83/JUN/NFKBIA | 4 |
| GO | B_10_10 | GO:0030217 | T cell differentiation | 5/41 | 320/18986 | 0.00060058799166593 | 0.0171094335186784 | 0.0125822798767498 | CD69/CD83/JUNB/LY9/NFKBID | 5 |
| MeSH_gene2pubmed | B_10_10 | D002196 | Capillaries | 5/41 | 440/26076 | 0.00060757569192748 | 0.00792818769555153 | 0.00492598210110096 | CXCR4/DUSP1/JUND/SLC2A3/ZFP36 | 5 |
| WikiPathways | B_10_10 | WP2018 | RANKL RANK signaling | 3/30 | 50/8836 | 0.00062163401455345 | 0.00674780753720451 | 0.00419412598803689 | FOS/JUN/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D004299 | Dopamine beta-Hydroxylase | 3/41 | 106/26076 | 0.000622010346626 | 0.00808062998979628 | 0.00502069832651547 | FOSB/JUN/NR4A2 | 3 |
| MeSH_gene2pubmed | B_10_10 | D019010 | Vascular Cell Adhesion Molecule-1 | 5/41 | 444/26076 | 0.00063291229222454 | 0.00816168111421149 | 0.00507105742540102 | DUSP1/FOS/JUN/KLF6/NFKBIA | 5 |
| MeSH_gene2pubmed | B_10_10 | D011470 | Prostatic Hyperplasia | 5/41 | 445/26076 | 0.00063936875213509 | 0.00816168111421149 | 0.00507105742540102 | AREG/BTG2/DUSP1/JUN/KLF6 | 5 |
| MeSH_gene2pubmed | B_10_10 | D016373 | DNA, Antisense | 5/41 | 445/26076 | 0.00063936875213509 | 0.00816168111421149 | 0.00507105742540102 | AREG/CXCR4/DUSP1/JUN/SLC2A3 | 5 |
| MeSH_gene2pubmed | B_10_10 | D019313 | BRCA1 Protein | 5/41 | 445/26076 | 0.00063936875213509 | 0.00816168111421149 | 0.00507105742540102 | DDIT3/FOS/JUN/JUNB/JUND | 5 |