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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D050787 | Proto-Oncogene Protein c-ets-2 | 3/41 | 98/26076 | 0.00049467693551611 | 0.00701560974242652 | 0.00435897450294893 | FOS/JUN/JUNB | 3 |
| MeSH_gene2pubmed | B_10_10 | D021881 | DNA, Catalytic | 2/41 | 21/26076 | 0.00049701867385038 | 0.00701560974242652 | 0.00435897450294893 | JUN/SERTAD1 | 2 |
| MeSH_gene2pubmed | B_10_10 | D051794 | Von Hippel-Lindau Tumor Suppressor Protein | 4/41 | 235/26076 | 0.00050118952771541 | 0.00704063374819363 | 0.00437452254611342 | CXCR4/JUND/NR4A1/SLC2A3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D008597 | Menstrual Cycle | 5/41 | 423/26076 | 0.00050831244992575 | 0.00705720608105023 | 0.00438481935266745 | AREG/CD83/CXCR4/DUSP2/FOS | 5 |
| MeSH_gene2pubmed | B_10_10 | D001152 | Arsenicals | 4/41 | 236/26076 | 0.00050925423813255 | 0.00705720608105023 | 0.00438481935266745 | AREG/DDIT3/JUN/PMAIP1 | 4 |
| MeSH_gene2pubmed | B_10_10 | D016516 | CD4-CD8 Ratio | 3/41 | 99/26076 | 0.00050958027560716 | 0.00705720608105023 | 0.00438481935266745 | CD69/CD83/CXCR4 | 3 |
| MeSH_gene2pubmed | B_10_10 | D038744 | Ribosomal Protein S6 Kinases, 90-kDa | 4/41 | 237/26076 | 0.00051741108957272 | 0.00713201389195073 | 0.00443129932408957 | DUSP1/FOS/JUN/NR4A1 | 4 |
| MeSH_gene2pubmed | B_10_10 | D003847 | Deoxyglucose | 4/41 | 238/26076 | 0.00052566068613162 | 0.00721186810505817 | 0.00448091475192378 | DDIT3/PMAIP1/PPP1R15A/SLC2A3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D007783 | Lactones | 4/41 | 240/26076 | 0.0005424405337636 | 0.00737317318115717 | 0.00458113764625892 | AREG/DDIT3/FOSB/TUBA1A | 4 |
| MeSH_gene2pubmed | B_10_10 | D051058 | Oncogene Protein v-akt | 4/41 | 240/26076 | 0.0005424405337636 | 0.00737317318115717 | 0.00458113764625892 | CXCR4/DUSP1/JUN/TSC22D3 | 4 |