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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_10 | GO:0001216 | DNA-binding transcription activator activity | 10/40 | 487/18737 | 5.40278082628541e-08 | 3.43076582469123e-06 | 2.41703352754874e-06 | CSRNP1/DDIT3/FOS/FOSB/JUN/JUNB/JUND/KLF6/NR4A1/NR4A2 | 10 |
| MeSH_gene2pubmed | B_10_10 | D018031 | Connexin 43 | 7/41 | 225/26076 | 5.68269665881079e-08 | 1.04277483689178e-05 | 6.47902191428888e-06 | AREG/DUSP1/FOS/FOSB/JUN/JUNB/JUND | 7 |
| GO | B_10_10 | GO:0140467 | integrated stress response signaling | 5/41 | 48/18986 | 5.83441183676561e-08 | 6.81459302534223e-05 | 5.01145269347446e-05 | DDIT3/FOS/JUN/JUNB/PPP1R15A | 5 |
| MeSH_gene2pubmed | B_10_10 | D010835 | Phytohemagglutinins | 8/41 | 367/26076 | 9.08982611734606e-08 | 1.56986644003106e-05 | 9.75397440331933e-06 | CD69/CD83/CXCR4/FOS/NFKBIA/SLC2A3/TSC22D3/ZFP36 | 8 |
| MeSH_gene2pubmed | B_10_10 | D051266 | Nuclear Respiratory Factor 1 | 5/41 | 74/26076 | 1.11023732095757e-07 | 1.81092043018413e-05 | 1.12517033755525e-05 | CXCR4/FOS/JUN/JUNB/JUND | 5 |
| MeSH_gene2pubmed | B_10_10 | D054638 | Dual Specificity Phosphatase 1 | 6/41 | 152/26076 | 1.34985973719986e-07 | 2.08588852022041e-05 | 1.29601491665781e-05 | AREG/CXCR4/DUSP1/DUSP2/JUNB/TSC22D3 | 6 |
| MeSH_gene2pubmed | B_10_10 | D050856 | Interferon Regulatory Factor-1 | 7/41 | 258/26076 | 1.44368027606189e-07 | 2.11932264525885e-05 | 1.31678837811329e-05 | BTG2/CD83/GADD45B/IFRD1/JUN/PMAIP1/PPP1R15A | 7 |
| MeSH_gene2pubmed | B_10_10 | D051906 | Smad7 Protein | 6/41 | 157/26076 | 1.63500702496627e-07 | 2.28589553585761e-05 | 1.42028429787797e-05 | FOSB/JUN/JUNB/JUND/PPP1R15A/ZFP36 | 6 |
| MeSH_gene2pubmed | B_10_10 | D016553 | Purpura, Thrombocytopenic, Idiopathic | 5/41 | 81/26076 | 1.75169975330792e-07 | 2.33772294350548e-05 | 1.45248596769503e-05 | AREG/CXCR4/DDIT3/DUSP2/IFRD1 | 5 |
| MeSH_gene2pubmed | B_10_10 | D015302 | Simian Immunodeficiency Virus | 7/41 | 275/26076 | 2.2244342351986e-07 | 2.61237556581724e-05 | 1.6231345387786e-05 | CD69/CD83/CHMP1B/CXCR4/FOS/JUN/NFKBIA | 7 |