Module Explorer
Instructions
- Enter a module name.
- Click Submit to search for the detailed information of the module.
- Results will appear below if available.
Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D051743 | CCAAT-Enhancer-Binding Protein-delta | 3/41 | 85/26076 | 0.00032582172460215 | 0.0052459278455444 | 0.00325942670168093 | BTG2/DDIT3/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D002070 | Butadienes | 5/41 | 384/26076 | 0.00032697711026383 | 0.0052459278455444 | 0.00325942670168093 | CXCR4/DUSP1/FOS/JUN/TSC22D3 | 5 |
| MeSH_gene2pubmed | B_10_10 | D003574 | Cytochrome c Group | 5/41 | 384/26076 | 0.00032697711026383 | 0.0052459278455444 | 0.00325942670168093 | CXCR4/DDIT3/NFKBIA/NR4A1/PMAIP1 | 5 |
| GO | B_10_10 | GO:0021537 | telencephalon development | 5/41 | 281/18986 | 0.00033206311055821 | 0.0110650337410203 | 0.00813722740868109 | BTG2/CXCR4/FOS/PHACTR1/TUBA1A | 5 |
| MeSH_gene2pubmed | B_10_10 | D017313 | Fenretinide | 3/41 | 86/26076 | 0.00033723070236319 | 0.00537761771359447 | 0.00334124892358354 | DDIT3/DUSP2/PMAIP1 | 3 |
| MeSH_gene2pubmed | B_10_10 | D019713 | Receptors, CCR5 | 5/41 | 387/26076 | 0.00033884852759365 | 0.00537761771359447 | 0.00334124892358354 | CD83/CXCR4/FOS/JUN/NFKBIA | 5 |
| GO | B_10_10 | GO:0017017 | MAP kinase tyrosine/serine/threonine phosphatase activity | 2/40 | 13/18737 | 0.00034149341503833 | 0.00619566624426687 | 0.00436495342530198 | DUSP1/DUSP2 | 2 |
| GO | B_10_10 | GO:0060213 | positive regulation of nuclear-transcribed mRNA poly(A) tail shortening | 2/41 | 13/18986 | 0.00034958390850034 | 0.0110650337410203 | 0.00813722740868109 | BTG2/ZFP36 | 2 |
| GO | B_10_10 | GO:0031960 | response to corticosteroid | 4/41 | 156/18986 | 0.00035051904830286 | 0.0110650337410203 | 0.00813722740868109 | AREG/FOS/FOSB/ZFP36 | 4 |
| MeSH_gene2pubmed | B_10_10 | D010972 | Platelet Activating Factor | 4/41 | 215/26076 | 0.00035832008400614 | 0.00562581693391465 | 0.00349546133173458 | CD69/FOS/JUN/TUBA1A | 4 |