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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D051636 | X-Linked Inhibitor of Apoptosis Protein | 4/41 | 203/26076 | 0.00028818819619132 | 0.00485991436553907 | 0.00301958683331393 | DDIT3/DUSP1/PMAIP1/SBDS | 4 |
| GO | B_10_10 | GO:0035259 | nuclear glucocorticoid receptor binding | 2/40 | 12/18737 | 0.00028934671213459 | 0.00612450540684885 | 0.00431481939148075 | NR4A1/NR4A2 | 2 |
| MeSH_gene2pubmed | B_10_10 | D006107 | Granulosa Cells | 5/41 | 374/26076 | 0.00028967473227838 | 0.00485991436553907 | 0.00301958683331393 | AREG/JUN/JUND/NR4A1/NR4A2 | 5 |
| MeSH_gene2pubmed | B_10_10 | D017304 | Annexin A5 | 5/41 | 375/26076 | 0.00029325169359911 | 0.00489197143413074 | 0.00303950469501957 | CD83/DDIT3/DUSP2/NR4A1/PMAIP1 | 5 |
| GO | B_10_10 | GO:0038066 | p38MAPK cascade | 3/41 | 60/18986 | 0.00029364651002996 | 0.0100876212857353 | 0.00741843814812547 | DUSP1/GADD45B/ZFP36 | 3 |
| MeSH_gene2pubmed | B_10_10 | D017879 | D017879 | 3/41 | 83/26076 | 0.00030375773154191 | 0.00503860282376879 | 0.00313061045948348 | DDIT3/NFKBIA/PPP1R15A | 3 |
| MeSH_gene2pubmed | B_10_10 | D019005 | Cystic Fibrosis Transmembrane Conductance Regulator | 5/41 | 380/26076 | 0.00031164320918569 | 0.00514036214701798 | 0.00319383608231112 | AREG/DDIT3/JUN/PPP1R15A/SBDS | 5 |
| MeSH_gene2pubmed | B_10_10 | D051702 | Activating Transcription Factor 6 | 3/41 | 84/26076 | 0.00031466488157508 | 0.00515564304160802 | 0.00320333048584064 | DDIT3/PMAIP1/PPP1R15A | 3 |
| MeSH_gene2pubmed | B_10_10 | D007529 | Isoflavones | 4/41 | 208/26076 | 0.00031608165786425 | 0.00515564304160802 | 0.00320333048584064 | DDIT3/DUSP1/NFKBIA/PMAIP1 | 4 |
| WikiPathways | B_10_10 | WP2526 | PDGF pathway | 3/30 | 40/8836 | 0.00032060949417519 | 0.00517907644436847 | 0.00321907508321649 | FOS/JUN/NFKBIA | 3 |