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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D016392 | Proto-Oncogene Proteins pp60(c-src) | 5/41 | 366/26076 | 0.00026224018748512 | 0.00461632010666601 | 0.00286823560334583 | CXCR4/DUSP1/JUN/NFKBIA/TUBA1A | 5 |
| MeSH_gene2pubmed | B_10_10 | D051257 | Proto-Oncogene Proteins c-maf | 3/41 | 79/26076 | 0.00026257679080831 | 0.00461632010666601 | 0.00286823560334583 | FOS/JUN/JUNB | 3 |
| reactome | B_10_10 | R-HSA-9018519 | Estrogen-dependent gene expression | 4/24 | 149/11146 | 0.00026464524189108 | 0.00933819639244241 | 0.00648679314710468 | FOS/FOSB/JUN/JUND | 4 |
| MeSH_gene2pubmed | B_10_10 | D016679 | Genome, Viral | 5/41 | 368/26076 | 0.00026890485491397 | 0.00469943246444904 | 0.00291987539828273 | AREG/DDIT3/FOS/JUN/ZFP36 | 5 |
| MeSH_gene2pubmed | B_10_10 | D004224 | Diterpenes | 4/41 | 200/26076 | 0.00027232796847293 | 0.0047064051567683 | 0.00292420770711296 | CD83/DDIT3/DUSP1/TUBA1A | 4 |
| MeSH_gene2pubmed | B_10_10 | D048308 | Mitogen-Activated Protein Kinase 14 | 3/41 | 80/26076 | 0.00027250983537146 | 0.0047064051567683 | 0.00292420770711296 | DUSP1/JUN/ZFP36 | 3 |
| MeSH_gene2pubmed | B_10_10 | D019302 | HIV Envelope Protein gp160 | 4/41 | 201/26076 | 0.00027754307246267 | 0.0047653009400609 | 0.00296080113621309 | CXCR4/FOS/JUN/NFKBIA | 4 |
| MeSH_gene2pubmed | B_10_10 | D052246 | Cyclooxygenase 2 Inhibitors | 4/41 | 202/26076 | 0.00028282962284265 | 0.00482783588759329 | 0.00299965566943897 | AREG/DDIT3/DUSP1/JUN | 4 |
| GO | B_10_10 | GO:0030098 | lymphocyte differentiation | 6/41 | 426/18986 | 0.00028477119295788 | 0.0100791743446911 | 0.0074122262664635 | CD69/CD83/JUNB/KLF6/LY9/NFKBID | 6 |
| MeSH_gene2pubmed | B_10_10 | D003208 | D003208 | 5/41 | 373/26076 | 0.00028613106372102 | 0.00485595839933487 | 0.00301712889217243 | CXCR4/FOSB/JUN/LY9/ZFP36 | 5 |