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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| WikiPathways | B_10_10 | WP1772 | Apoptosis modulation and signaling | 4/30 | 92/8836 | 0.00024517519784987 | 0.00429056596237287 | 0.00266681794152499 | FOS/JUN/NFKBIA/PMAIP1 | 4 |
| GO | B_10_10 | GO:1904627 | response to phorbol 13-acetate 12-myristate | 2/41 | 11/18986 | 0.0002471772158411 | 0.00914995858894532 | 0.0067288808656988 | BTG2/FOS | 2 |
| GO | B_10_10 | GO:1904628 | cellular response to phorbol 13-acetate 12-myristate | 2/41 | 11/18986 | 0.0002471772158411 | 0.00914995858894532 | 0.0067288808656988 | BTG2/FOS | 2 |
| MeSH_gene2pubmed | B_10_10 | D016660 | NAD(P)H Dehydrogenase (Quinone) | 4/41 | 195/26076 | 0.00024730403684425 | 0.00450984256009149 | 0.00280207842988619 | FOS/JUN/JUNB/JUND | 4 |
| GO | B_10_10 | GO:0030900 | forebrain development | 6/41 | 416/18986 | 0.0002506837969574 | 0.00914995858894532 | 0.0067288808656988 | BTG2/CXCR4/FOS/NR4A2/PHACTR1/TUBA1A | 6 |
| MeSH_gene2pubmed | B_10_10 | D018501 | Antirheumatic Agents | 4/41 | 196/26076 | 0.00025217052110431 | 0.00457020154297701 | 0.00283958098163601 | CD83/CXCR4/DUSP1/ZFP36 | 4 |
| MeSH_gene2pubmed | B_10_10 | D000873 | Anthracenes | 4/41 | 197/26076 | 0.00025710558455692 | 0.00460281705036057 | 0.00285984581538609 | CD83/FOS/JUN/NFKBIA | 4 |
| MeSH_gene2pubmed | B_10_10 | D053509 | Matrix Metalloproteinase 13 | 4/41 | 197/26076 | 0.00025710558455692 | 0.00460281705036057 | 0.00285984581538609 | CXCR4/FOS/GADD45B/JUN | 4 |
| KEGG | B_10_10 | hsa04668 | TNF signaling pathway | 4/23 | 119/8541 | 0.00025847527835143 | 0.0054710600584386 | 0.00344633704468573 | FOS/JUN/JUNB/NFKBIA | 4 |
| MeSH_gene2pubmed | B_10_10 | D018432 | Drug Resistance, Multiple | 5/41 | 365/26076 | 0.00025895542391876 | 0.00460783711894238 | 0.00286296491005563 | CD83/DDIT3/DUSP1/JUN/PMAIP1 | 5 |