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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_10_10 | R-HSA-166520 | Signaling by NTRKs | 4/24 | 134/11146 | 0.00017608623658214 | 0.00814561953291915 | 0.0056583677130442 | FOS/FOSB/JUNB/JUND | 4 |
| WikiPathways | B_10_10 | WP4880 | Host pathogen interaction of human coronaviruses interferon induction | 3/30 | 33/8836 | 0.00017991042213524 | 0.00343465351349106 | 0.00213482223394933 | FOS/JUN/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D001141 | Aromatase | 4/41 | 180/26076 | 0.0001821512785457 | 0.00358923593161196 | 0.00223008241412718 | JUN/JUND/NR4A1/NR4A2 | 4 |
| MeSH_gene2pubmed | B_10_10 | D019893 | Ribosomal Protein S6 Kinases | 5/41 | 341/26076 | 0.0001890950511249 | 0.00369474347052603 | 0.00229563689746938 | CD83/CXCR4/FOS/NFKBIA/NR4A1 | 5 |
| MeSH_gene2pubmed | B_10_10 | D001897 | Boronic Acids | 4/41 | 182/26076 | 0.00019002256949912 | 0.00369474347052603 | 0.00229563689746938 | DDIT3/DUSP1/GADD45B/PMAIP1 | 4 |
| MeSH_gene2pubmed | B_10_10 | D015292 | Glycoprotein Hormones, alpha Subunit | 3/41 | 71/26076 | 0.0001914421160988 | 0.00369785561096105 | 0.00229757054847106 | FOS/JUND/NR4A1 | 3 |
| GO | B_10_10 | GO:0051384 | response to glucocorticoid | 4/41 | 134/18986 | 0.00019620323462853 | 0.00836425142071377 | 0.0061510717008854 | AREG/FOS/FOSB/ZFP36 | 4 |
| MeSH_gene2pubmed | B_10_10 | D019332 | Endothelin-1 | 5/41 | 344/26076 | 0.00019693070792274 | 0.00377901018602083 | 0.00234799392383985 | CD83/DDIT3/FOSB/JUN/JUNB | 5 |
| GO | B_10_10 | GO:0008330 | protein tyrosine/threonine phosphatase activity | 2/40 | 10/18737 | 0.00019781586970745 | 0.00502452309056938 | 0.0035398629316071 | DUSP1/DUSP2 | 2 |
| GO | B_10_10 | GO:0033550 | MAP kinase tyrosine phosphatase activity | 2/40 | 10/18737 | 0.00019781586970745 | 0.00502452309056938 | 0.0035398629316071 | DUSP1/DUSP2 | 2 |