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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D047630 | Depsipeptides | 4/41 | 169/26076 | 0.00014300299751766 | 0.00297770780646703 | 0.00185012463380445 | DUSP1/GADD45B/PMAIP1/TUBA1A | 4 |
| MeSH_gene2pubmed | B_10_10 | D051958 | Nuclear Receptor Coactivator 2 | 4/41 | 170/26076 | 0.00014628304898051 | 0.00301730757525826 | 0.0018747289645499 | JUN/JUNB/NFKBIA/TSC22D3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D018931 | Antineoplastic Agents, Hormonal | 5/41 | 323/26076 | 0.00014696014416278 | 0.00301730757525826 | 0.0018747289645499 | AREG/CXCR4/DUSP1/JUND/PMAIP1 | 5 |
| GO | B_10_10 | GO:0045622 | regulation of T-helper cell differentiation | 3/41 | 48/18986 | 0.00015111138793419 | 0.00678838850412096 | 0.00499218188478974 | CD69/JUNB/NFKBID | 3 |
| MeSH_gene2pubmed | B_10_10 | D016861 | Cyclooxygenase Inhibitors | 5/41 | 327/26076 | 0.00015562981589691 | 0.00317311902412047 | 0.00197153853033155 | AREG/CXCR4/DDIT3/DUSP1/DUSP2 | 5 |
| MeSH_gene2pubmed | B_10_10 | D000590 | Amino Acid Chloromethyl Ketones | 5/41 | 328/26076 | 0.00015785720131877 | 0.00319633615911662 | 0.00198596391931346 | DDIT3/JUN/NFKBIA/PMAIP1/PPP1R15A | 5 |
| MeSH_gene2pubmed | B_10_10 | D005802 | Genes, MHC Class II | 5/41 | 329/26076 | 0.00016010893262201 | 0.00319782194679072 | 0.0019868870765052 | CD83/CXCR4/FOS/NFKBIA/ZFP36 | 5 |
| MeSH_gene2pubmed | B_10_10 | D014763 | Viral Matrix Proteins | 5/41 | 329/26076 | 0.00016010893262201 | 0.00319782194679072 | 0.0019868870765052 | CD83/CXCR4/JUN/JUNB/NFKBIA | 5 |
| MeSH_gene2pubmed | B_10_10 | D053220 | Receptors, TNF-Related Apoptosis-Inducing Ligand | 4/41 | 177/26076 | 0.00017078995202583 | 0.00338810337262052 | 0.00210511370455735 | BTG2/DDIT3/PMAIP1/PPP1R15A | 4 |
| GO | B_10_10 | GO:0090575 | RNA polymerase II transcription regulator complex | 5/41 | 257/19960 | 0.00017465171533073 | 0.0195609921170425 | 0.0176490154439481 | DDIT3/FOS/JUN/JUNB/JUND | 5 |