Module Explorer
Instructions
- Enter a module name.
- Click Submit to search for the detailed information of the module.
- Results will appear below if available.
Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D016192 | Resting Phase, Cell Cycle | 6/41 | 473/26076 | 9.05790142029524e-05 | 0.00212751988559895 | 0.00132188152937867 | DDIT3/DUSP1/FOS/FOSB/JUN/SERTAD1 | 6 |
| MeSH_gene2pubmed | B_10_10 | D016325 | HIV Long Terminal Repeat | 6/41 | 474/26076 | 9.16343304083939e-05 | 0.00213522534983369 | 0.00132666912780072 | CXCR4/DDIT3/FOS/JUN/JUNB/NFKBIA | 6 |
| reactome | B_10_10 | R-HSA-8939211 | ESR-mediated signaling | 5/24 | 222/11146 | 9.34878805018391e-05 | 0.00601639390668127 | 0.00417929770632451 | AREG/FOS/FOSB/JUN/JUND | 5 |
| MeSH_gene2pubmed | B_10_10 | D005814 | Genes, Viral | 6/41 | 476/26076 | 9.37744073722988e-05 | 0.00216788708696905 | 0.00134696268525648 | FOS/GADD45B/JUN/NFKBIA/PMAIP1/PPP1R15A | 6 |
| MeSH_gene2pubmed | B_10_10 | D053583 | Interleukin-1beta | 6/41 | 477/26076 | 9.48593017745898e-05 | 0.00217583523445465 | 0.00135190106887635 | AREG/CD83/DUSP1/JUN/NFKBIA/ZFP36 | 6 |
| reactome | B_10_10 | R-HSA-187037 | Signaling by NTRK1 (TRKA) | 4/24 | 115/11146 | 9.7431480270142e-05 | 0.00601639390668127 | 0.00417929770632451 | FOS/FOSB/JUNB/JUND | 4 |
| WikiPathways | B_10_10 | WP4216 | Chromosomal and microsatellite instability in colorectal cancer | 4/30 | 73/8836 | 9.98784153559088e-05 | 0.00209744672247408 | 0.00130367615832976 | FOS/GADD45B/JUN/PMAIP1 | 4 |
| MeSH_gene2pubmed | B_10_10 | D000893 | Anti-Inflammatory Agents | 6/41 | 483/26076 | 0.00010158090412675 | 0.00231194987997006 | 0.0014364725161294 | CD83/DUSP1/NFKBIA/NR4A2/TSC22D3/ZFP36 | 6 |
| MeSH_gene2pubmed | B_10_10 | D014594 | Uterine Neoplasms | 6/41 | 486/26076 | 0.00010508121774108 | 0.00237321888682943 | 0.00147454048862591 | DDIT3/DUSP1/FOS/JUN/SLC2A3/ZFP36 | 6 |
| MeSH_gene2pubmed | B_10_10 | D053454 | Caspase 12 | 3/41 | 59/26076 | 0.00011032438492155 | 0.00247261369564651 | 0.00153629697926122 | DDIT3/PMAIP1/PPP1R15A | 3 |