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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D016539 | Reed-Sternberg Cells | 4/41 | 143/26076 | 7.50050498028664e-05 | 0.00189647794562954 | 0.00117832937034849 | CD83/JUN/JUNB/NFKBIA | 4 |
| MeSH_gene2pubmed | B_10_10 | D013759 | Dronabinol | 3/41 | 52/26076 | 7.55749045090792e-05 | 0.00189647794562954 | 0.00117832937034849 | AREG/DDIT3/JUND | 3 |
| MeSH_gene2pubmed | B_10_10 | D015124 | 8-Bromo Cyclic Adenosine Monophosphate | 5/41 | 282/26076 | 7.77944449831295e-05 | 0.00193563127517346 | 0.00120265631717898 | AREG/CD83/DUSP1/NR4A1/SLC2A3 | 5 |
| MeSH_gene2pubmed | B_10_10 | D012176 | Retinoids | 5/41 | 286/26076 | 8.31288341023241e-05 | 0.00202545025856035 | 0.00125846310701459 | AREG/DDIT3/GADD45B/JUN/NR4A1 | 5 |
| MeSH_gene2pubmed | B_10_10 | D015375 | Receptors, Interleukin-2 | 6/41 | 466/26076 | 8.34604502355556e-05 | 0.00202545025856035 | 0.00125846310701459 | CD69/CD83/CXCR4/JUN/SLC2A3/TSC22D3 | 6 |
| MeSH_gene2pubmed | B_10_10 | D008741 | Methyl Methanesulfonate | 4/41 | 147/26076 | 8.3473937767644e-05 | 0.00202545025856035 | 0.00125846310701459 | DDIT3/DUSP1/GADD45B/PPP1R15A | 4 |
| MeSH_gene2pubmed | B_10_10 | D051059 | PTEN Phosphohydrolase | 6/41 | 470/26076 | 8.7471158589267e-05 | 0.00210504361982039 | 0.00130791646104573 | CXCR4/DUSP1/FOS/JUN/KLF6/NFKBIA | 6 |
| MeSH_gene2pubmed | B_10_10 | D004722 | Endoribonucleases | 5/41 | 290/26076 | 8.87409312330009e-05 | 0.00211728289123256 | 0.0013155210277162 | DDIT3/JUN/PMAIP1/PPP1R15A/ZFP36 | 5 |
| MeSH_gene2pubmed | B_10_10 | D013148 | Spironolactone | 3/41 | 55/26076 | 8.94220294662255e-05 | 0.00211728289123256 | 0.0013155210277162 | DDIT3/DUSP1/TSC22D3 | 3 |
| GO | B_10_10 | GO:0061629 | RNA polymerase II-specific DNA-binding transcription factor binding | 6/40 | 349/18737 | 8.99566947001873e-05 | 0.00380816674230793 | 0.00268291896474243 | DDIT3/FOS/JUN/NFKBIA/NR4A1/NR4A2 | 6 |