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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D051880 | Receptors, Notch | 6/41 | 427/26076 | 5.15246132129704e-05 | 0.00151276264393281 | 0.0009399174178745 | CXCR4/DUSP1/FOS/JUN/NFKBIA/PMAIP1 | 6 |
| MeSH_gene2pubmed | B_10_10 | D007546 | D007546 | 6/41 | 428/26076 | 5.21968542469712e-05 | 0.00151732637692186 | 0.00094275297978114 | AREG/CXCR4/DDIT3/DUSP1/FOS/NFKBIA | 6 |
| MeSH_gene2pubmed | B_10_10 | D034904 | Lamin Type A | 4/41 | 131/26076 | 5.33384530765077e-05 | 0.00153531076698654 | 0.00095392713293692 | AREG/BTG2/FOS/JUN | 4 |
| MeSH_gene2pubmed | B_10_10 | D018106 | CD28 Antigens | 6/41 | 431/26076 | 5.42559023296037e-05 | 0.00154655659456035 | 0.00096091444800412 | CD83/CXCR4/DDIT3/JUN/NFKBIA/PMAIP1 | 6 |
| MeSH_gene2pubmed | B_10_10 | D053491 | Proteinase Inhibitory Proteins, Secretory | 4/41 | 132/26076 | 5.49429621696474e-05 | 0.0015510820858662 | 0.0009637262493927 | AREG/CXCR4/DUSP1/NFKBIA | 4 |
| MeSH_gene2pubmed | B_10_10 | D006509 | Hepatitis B | 5/41 | 263/26076 | 5.59568697403881e-05 | 0.00156466066245504 | 0.00097216296000092 | CD83/CXCR4/EIF1/KLF6/NR4A1 | 5 |
| MeSH_gene2pubmed | B_10_10 | D045304 | Cytochromes c | 6/41 | 437/26076 | 5.85694026385516e-05 | 0.00162226194478101 | 0.00100795208314409 | DDIT3/GADD45B/JUN/NR4A1/PMAIP1/TUBA1A | 6 |
| WikiPathways | B_10_10 | WP4925 | Unfolded protein response | 3/30 | 23/8836 | 5.9752023595424e-05 | 0.00139421388389323 | 0.00086657905565293 | DDIT3/PMAIP1/PPP1R15A | 3 |
| MeSH_gene2pubmed | B_10_10 | D015368 | Human T-lymphotropic virus 1 | 6/41 | 439/26076 | 6.00667674279036e-05 | 0.00164818718848902 | 0.00102406008807237 | DDIT3/JUNB/JUND/NFKBIA/PMAIP1/ZFP36 | 6 |
| MeSH_gene2pubmed | B_10_10 | D009506 | Nevus | 4/41 | 136/26076 | 6.17154291863904e-05 | 0.00167774537121521 | 0.00104242532923991 | AREG/DDIT3/DUSP1/PPP1R15A | 4 |