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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_10_10 | D055551 | HSP27 Heat-Shock Proteins | 5/41 | 218/26076 | 2.28770005950368e-05 | 0.00082922066354355 | 0.00051521562093825 | DDIT3/DUSP1/FOS/NFKBIA/PPP1R15A | 5 |
| MeSH_gene2pubmed | B_10_10 | D051767 | Early Growth Response Protein 2 | 4/41 | 106/26076 | 2.3264960015565e-05 | 0.00083299905616705 | 0.00051756323115499 | DUSP1/FOS/JUN/TSC22D3 | 4 |
| MeSH_gene2pubmed | B_10_10 | D053284 | Polyunsaturated Alkamides | 4/41 | 107/26076 | 2.4141060311722e-05 | 0.00085395365150862 | 0.00053058284743454 | AREG/DDIT3/DUSP1/FOS | 4 |
| MeSH_gene2pubmed | B_10_10 | D007079 | D007079 | 3/41 | 36/26076 | 2.48467759529181e-05 | 0.00086845397854485 | 0.00053959226474194 | CD83/FOS/JUN | 3 |
| MeSH_gene2pubmed | B_10_10 | D053594 | Myeloid Differentiation Factor 88 | 5/41 | 223/26076 | 2.55031777096071e-05 | 0.00087626554489433 | 0.00054444578707223 | AREG/CD83/DUSP1/GADD45B/PPP1R15A | 5 |
| MeSH_gene2pubmed | B_10_10 | D025842 | SUMO-1 Protein | 6/41 | 377/26076 | 2.57356904236734e-05 | 0.00087626554489433 | 0.00054444578707223 | FOS/JUN/JUNB/NFKBIA/NR4A2/PMAIP1 | 6 |
| MeSH_gene2pubmed | B_10_10 | D054426 | Chemokine CXCL2 | 4/41 | 109/26076 | 2.5965634334403e-05 | 0.00087626554489433 | 0.00054444578707223 | AREG/BTG2/CXCR4/JUN | 4 |
| GO | B_10_10 | GO:0046637 | regulation of alpha-beta T cell differentiation | 4/41 | 80/18986 | 2.62857087087725e-05 | 0.00206793827308799 | 0.00152076210421756 | CD69/CD83/JUNB/NFKBID | 4 |
| GO | B_10_10 | GO:0042093 | T-helper cell differentiation | 4/41 | 81/18986 | 2.76081550408214e-05 | 0.00206793827308799 | 0.00152076210421756 | CD69/JUNB/LY9/NFKBID | 4 |
| MeSH_gene2pubmed | B_10_10 | D048371 | MAP Kinase Kinase 3 | 4/41 | 112/26076 | 2.88896153680017e-05 | 0.00096386262182333 | 0.00059887205063094 | CD83/DDIT3/DUSP1/NFKBIA | 4 |