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Selected Module: B_10_10
Module Info
| Module_Name | B_10_10 |
| Cell_Type | B |
| Name | B_10_10: HALLMARK_TNFA_SIGNALING_VIA_NFKB |
| Meta_Module | B_12 |
| Gene_Number | 41 |
Genes:
ALG13, AREG, BTG2, CCNL1, CD69, CD83, CHMP1B, COQ7, CSRNP1, CXCR4, DDIT3, DUSP1, DUSP2, EIF1, FOS, FOSB, GADD45B, IER2, IFRD1, JUN, JUNB, JUND, KLF6, LY9, MYADM, NFKBIA, NFKBID, NR4A1, NR4A2, PHACTR1, PMAIP1, PPP1R15A, RBM38, SBDS, SERTAD1, SLC2A3, TSC22D3, TUBA1A, YPEL5, ZFP36, ZNF331
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| PSMB5 | 4.90379990902434e-09 | BTG2/CCNL1/DUSP1/EIF1/JUNB/PMAIP1/PPP1R15A/SLC2A3/TUBA1A/ZFP36 |
| CREB | 4.90379990902434e-09 | AREG/CHMP1B/DUSP1/EIF1/FOSB/JUND/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 4.90379990902434e-09 | AREG/DUSP1/FOSB/JUN/JUND/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| CREB | 1.73096420202783e-08 | DUSP1/EIF1/FOS/FOSB/GADD45B/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| SRF | 1.17134429958281e-07 | DUSP2/FOS/FOSB/IER2/IFRD1/JUNB/KLF6/NR4A1 |
| CREB | 3.64129821560901e-07 | DUSP1/EIF1/FOS/FOSB/NFKBID/NR4A2/PPP1R15A/TSC22D3 |
| ATF | 6.82227196758743e-07 | AREG/CHMP1B/DUSP1/FOS/FOSB/JUND/PPP1R15A |
| SRF | 1.34911861648055e-06 | DUSP2/FOS/FOSB/IER2/JUNB/KLF6/NR4A1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| WikiPathways | B_10_10 | WP382 | MAPK signaling | 7/30 | 247/8836 | 1.43862920165816e-05 | 0.00050352022058035 | 0.00031296494913265 | DDIT3/DUSP1/DUSP2/FOS/JUN/JUND/NR4A1 | 7 |
| onek1k | B_10_10 | B naive | B naive | 7/28 | 196/6471 | 1.44893859135603e-05 | 0.00011591508730848 | 9.15119110330124e-05 | CD69/CD83/CXCR4/NFKBID/PHACTR1/PMAIP1/TSC22D3 | 7 |
| MeSH_gene2pubmed | B_10_10 | D016759 | Oncogene Protein p65(gag-jun) | 3/41 | 31/26076 | 1.57279959264687e-05 | 0.00062175872839765 | 0.00038631431102579 | JUN/JUNB/JUND | 3 |
| MeSH_gene2pubmed | B_10_10 | D011839 | Radiation, Ionizing | 6/41 | 346/26076 | 1.5882801304436e-05 | 0.00062175872839765 | 0.00038631431102579 | AREG/DDIT3/GADD45B/JUN/NFKBIA/PPP1R15A | 6 |
| MeSH_gene2pubmed | B_10_10 | D018946 | Chemokine CCL5 | 6/41 | 355/26076 | 1.83573393404251e-05 | 0.00070917300399326 | 0.00044062699552571 | CD83/CXCR4/FOS/JUN/JUND/NFKBIA | 6 |
| WikiPathways | B_10_10 | WP2435 | Quercetin and Nf kB AP 1 induced apoptosis | 3/30 | 16/8836 | 1.91996109430915e-05 | 0.00057598832829274 | 0.00035800778299899 | FOS/JUN/NFKBIA | 3 |
| MeSH_gene2pubmed | B_10_10 | D051698 | Activating Transcription Factor 2 | 5/41 | 214/26076 | 2.09318429159014e-05 | 0.00079812845196216 | 0.00049589724912176 | DDIT3/DUSP1/FOS/JUN/JUNB | 5 |
| MeSH_gene2pubmed | B_10_10 | D051696 | Activating Transcription Factors | 4/41 | 105/26076 | 2.24124404083648e-05 | 0.00082922066354355 | 0.00051521562093825 | DDIT3/FOS/JUN/JUND | 4 |
| MeSH_gene2pubmed | B_10_10 | D051745 | Protein Kinase C-delta | 6/41 | 368/26076 | 2.24730373703571e-05 | 0.00082922066354355 | 0.00051521562093825 | BTG2/DDIT3/DUSP1/JUN/JUNB/ZFP36 | 6 |
| MeSH_gene2pubmed | B_10_10 | D051742 | Transcription Factor CHOP | 5/41 | 218/26076 | 2.28770005950368e-05 | 0.00082922066354355 | 0.00051521562093825 | DDIT3/FOS/JUN/JUND/PPP1R15A | 5 |