Module Explorer
Instructions
- Enter a module name.
- Click Submit to search for the detailed information of the module.
- Results will appear below if available.
Selected Module: B_10_1
Module Info
| Module_Name | B_10_1 |
| Cell_Type | B |
| Name | B_10_1: RNA splicing |
| Meta_Module | B_6 |
| Gene_Number | 104 |
Genes:
ACIN1, ADAM17, ANKRD11, ANKRD12, AQR, ARAP2, ATAD2B, ATM, ATRX, BCLAF1, BIRC6, BRAF, CCNL2, CCNT2, CELF2, CENATAC, CEP350, CHD1, CYTH1, DDHD1, DDX3X, DENND4A, DIDO1, DNAJB14, EP300, EPB41, ERBIN, FAM133B, FUS, HELZ, IKBKB, IQGAP1, IREB2, KANSL1, KDM2A, KDM5A, KMT2C, LUC7L3, MAP3K1, MAP3K2, MECP2, MIDEAS, MIER1, NFAT5, NKTR, OSBPL8, PCM1, PHIP, PKN2, PPP4R3A, PRRC2C, PTBP3, PUM2, RAB11FIP1, RAB3GAP1, RAB3GAP2, RAB8B, RBM25, RBM39, RESF1, RLF, RLIM, RNF19A, ROCK1, RSF1, SAFB, SAFB2, SCAF8, SECISBP2, SERINC1, SF3B1, SFT2D2, SLC38A1, SMCHD1, SMG1, SNRNP200, SNX13, SON, SPAG9, SPG7, SREK1, SRSF11, STK17B, THOC1, TRA2A, TRIP12, TRPM7, UBA6, UBXN7, UPF2, USP22, USP47, USP9X, VPS13A, VPS4B, YTHDF3, ZBTB11, ZC3H13, ZFC3H1, ZNF148, ZNF207, ZNF292, ZNF638, ZZEF1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| GCCATNTTG | 3.58431928138037e-10 | ATRX/DDX3X/DENND4A/EP300/FUS/KDM2A/LUC7L3/PRRC2C/RBM39/RLIM/SAFB/SCAF8/SNX13/TRA2A/ZBTB11/ZNF207/ZNF638 |
| THRA | 2.91377409546355e-06 | ADAM17/ATM/CCNT2/CEP350/SAFB/SAFB2/UPF2/ZNF292 |
| YY1 | 7.18197029477343e-06 | DENND4A/EP300/KDM2A/LUC7L3/PRRC2C/RBM39/SNX13/ZNF207/ZNF638/ZZEF1 |
| E2F1 | 0.0003548583253826 | ATRX/CCNT2/ERBIN/LUC7L3/PRRC2C/SLC38A1/SMG1/SREK1 |
| SMTTTTGT | 0.00036727922822081 | ATRX/DDX3X/FUS/KDM2A/LUC7L3/SAFB/SLC38A1/ZBTB11/ZNF207/ZNF638 |
| NFMUE1 | 0.00037028470225628 | BCLAF1/EP300/KDM2A/LUC7L3/PRRC2C/SNX13/ZNF207/ZZEF1 |
| YY1 | 0.00037028470225628 | DDX3X/DIDO1/FUS/LUC7L3/PTBP3/RAB8B/RBM39/SNX13 |
| MYB | 0.00037028470225628 | EPB41/LUC7L3/MIDEAS/RBM39/SECISBP2/SF3B1/SPAG9/ZNF148 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_10_1 | GO:0016887 | ATP hydrolysis activity | 10/102 | 418/18737 | 9.39279435766258e-05 | 0.00531632160643702 | 0.00438989546821283 | ACIN1/AQR/ATAD2B/ATRX/CHD1/DDX3X/SMCHD1/SNRNP200/SPG7/VPS4B | 10 |
| MeSH_gene2pubmed | B_10_1 | D048749 | Cytokinesis | 6/104 | 186/26076 | 0.00010331152293839 | 0.0247868184649876 | 0.0227034391299426 | BIRC6/DIDO1/IKBKB/IQGAP1/PKN2/ROCK1 | 6 |
| GO | B_10_1 | GO:0043923 | positive regulation by host of viral transcription | 3/102 | 18/18986 | 0.00011584813313943 | 0.0148826235039789 | 0.013324567734423 | CCNT2/CHD1/EP300 | 3 |
| GO | B_10_1 | GO:0004674 | protein serine/threonine kinase activity | 10/102 | 429/18737 | 0.00011625111366113 | 0.00548317752768372 | 0.00452767495311804 | ATM/BRAF/IKBKB/MAP3K1/MAP3K2/PKN2/ROCK1/SMG1/STK17B/TRPM7 | 10 |
| GO | B_10_1 | GO:0010494 | cytoplasmic stress granule | 5/102 | 94/19960 | 0.00012087604931649 | 0.00453285184936849 | 0.00390196369723416 | DDX3X/PRRC2C/PUM2/ROCK1/YTHDF3 | 5 |
| GO | B_10_1 | GO:0006402 | mRNA catabolic process | 9/102 | 356/18986 | 0.00012812617870071 | 0.0154311966472671 | 0.013815710979636 | ATM/FUS/IREB2/PUM2/ROCK1/SECISBP2/SMG1/UPF2/YTHDF3 | 9 |
| GO | B_10_1 | GO:0010171 | body morphogenesis | 4/102 | 52/18986 | 0.00017437280799165 | 0.0197656706470544 | 0.017696410668627 | ANKRD11/BRAF/EP300/RAB3GAP1 | 4 |
| GO | B_10_1 | GO:0060324 | face development | 4/102 | 53/18986 | 0.00018783332078681 | 0.0201086005086773 | 0.0180034393432508 | ANKRD11/BRAF/EP300/RAB3GAP1 | 4 |
| GO | B_10_1 | GO:0004386 | helicase activity | 6/102 | 154/18737 | 0.00019666867203546 | 0.00795103345514808 | 0.00656548047998093 | AQR/ATRX/CHD1/DDX3X/HELZ/SNRNP200 | 6 |
| GO | B_10_1 | GO:0019083 | viral transcription | 4/102 | 54/18986 | 0.00020202761033451 | 0.0204898529007688 | 0.0183447785782973 | CCNT2/CHD1/EP300/RSF1 | 4 |